KEGG   Halothiobacillus sp. LS2: A9404_09185
Entry
A9404_09185       CDS       T04441                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
haz  Halothiobacillus sp. LS2
Pathway
haz03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:haz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    A9404_09185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:haz03021]
    A9404_09185
   03400 DNA repair and recombination proteins [BR:haz03400]
    A9404_09185
Enzymes [BR:haz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     A9404_09185
Transcription machinery [BR:haz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     A9404_09185
DNA repair and recombination proteins [BR:haz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      A9404_09185
SSDB
Motif
Pfam: RNA_pol_Rpb6 RHH_8
Other DBs
NCBI-ProteinID: ANJ67537
UniProt: A0A191ZI58
Position
2089354..2089677
AA seq 107 aa
MARVTVEDCLAKVPNRFELVLMAARRARQIEQGAEPLVPMGKEKPVVIALREIGEGKIDE
AQINEIQANMVVLRSQISEAEIRAELAQFADESEGAVRRTPVSSDEG
NT seq 324 nt   +upstreamnt  +downstreamnt
atggcgcgtgtcaccgtagaagattgtctggcgaaagttcccaaccgctttgagttggtt
ttgatggcggcgcgacgtgcccggcagattgagcagggcgcagagccgctggtcccgatg
ggcaaggaaaaacctgtggtcatcgccctgcgcgagatcggcgaaggcaagatcgacgag
gcgcagatcaacgagattcaggccaacatggtcgtcctgcgttcgcagatctccgaagcc
gaaattcgcgctgaattggctcagttcgccgacgagagcgaaggtgccgttcgccgtaca
ccggttagcagcgacgagggttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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