KEGG   Helicobacter bizzozeronii: HBZC1_06080
Entry
HBZC1_06080       CDS       T01540                                 
Name
(GenBank) DNA-directed RNA polymerase omega subunit
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
hbi  Helicobacter bizzozeronii
Pathway
hbi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hbi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HBZC1_06080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hbi03021]
    HBZC1_06080
   03400 DNA repair and recombination proteins [BR:hbi03400]
    HBZC1_06080
Enzymes [BR:hbi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     HBZC1_06080
Transcription machinery [BR:hbi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     HBZC1_06080
DNA repair and recombination proteins [BR:hbi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      HBZC1_06080
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: CCB79594
UniProt: F8KS44
Position
complement(577538..577753)
AA seq 71 aa
MRTEEIVAKALEKVDSDRYVLSNLIFSRVKQLGAGAHPLVPVDTKIHKLTDIAILEIAEG
KISLDRIDGRY
NT seq 216 nt   +upstreamnt  +downstreamnt
ttgagaaccgaagaaattgtagccaaagccttagaaaaagtggatagcgatcgttatgtt
ctgtcaaacttgattttttcacgggtcaaacagctaggagcaggcgcgcaccccctagtc
cccgtggataccaagattcacaaactgacagacatcgccattttagaaattgctgaggga
aaaatcagtcttgatcgcattgatggaagatactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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