KEGG   Hevea brasiliensis (rubber tree): 110633007
Entry
110633007         CDS       T05150                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
hbr  Hevea brasiliensis (rubber tree)
Pathway
hbr03020  RNA polymerase
hbr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110633007
  09124 Replication and repair
   03420 Nucleotide excision repair
    110633007
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hbr03021]
    110633007
   03400 DNA repair and recombination proteins [BR:hbr03400]
    110633007
Transcription machinery [BR:hbr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     110633007
DNA repair and recombination proteins [BR:hbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110633007
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C zf-LSD1
Other DBs
NCBI-GeneID: 110633007
NCBI-ProteinID: XP_021637128
Position
Unknown
AA seq 114 aa
MSTMKFCRECNNILYPKEDKEQKILLYACRNCDHQEIAENNCVYRNEVHHSVAERTQVLQ
DVAADPTLPRTKSVKCSMCNHQEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtaccatgaaattttgtcgcgagtgcaacaacattctctaccctaaggaggataag
gaacagaagatcctcctctatgcttgccgcaattgcgatcatcaggaaattgctgaaaat
aactgtgtatacagaaatgaggtacatcactctgtagcagagcggactcaggtactgcag
gatgtagctgcagatccaacacttcctcgcactaaatccgttaagtgcagcatgtgcaac
catcaagaagctgtcttcttccaggcaactgctaggggagaggaaggtatgacgctgttc
tttgtatgctgcaaccctaattgtgggcatagatggagagattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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