KEGG   Hevea brasiliensis (rubber tree): 110643619
Entry
110643619         CDS       T05150                                 
Name
(RefSeq) THO complex subunit 5B
  KO
K13174  THO complex subunit 5
Organism
hbr  Hevea brasiliensis (rubber tree)
Pathway
hbr03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:hbr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110643619
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hbr03019]
    110643619
   03041 Spliceosome [BR:hbr03041]
    110643619
Messenger RNA biogenesis [BR:hbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     110643619
Spliceosome [BR:hbr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110643619
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 110643619
NCBI-ProteinID: XP_021651769
Position
Unknown
AA seq 803 aa
MEDGEIVEGVAMEEDAQLTTQPKNGKSPYEMLREGKVSVEEIVAQILTIKKENKPKSELR
ELVTQIFLHFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLHNLMYEKSHYVKAIK
ACKDFKSKYPDIELVPEEEFFRDAPENIKGPVLSDDTSHNLMLKRLNYELHQRKELCKLH
EKLEQRKKSLLETIANRKKFLSSLPSHLKSLKKASLPVQNQLGVLHTKKLKQQNSAELLP
PPLYVIYTQFLAQKEAFGEHIDLEIVGSLKDAQAFARQQANKDTGISSTVESSRLEDDAP
DEEDDGQRRRKRPKRVPSKESLDHVGVLQVHPLKIILHVYDDEVSDPKSAKLITLKFEYL
FKLNIVCVGVEGSHEGPENNILCNLFPDDTGVELPHQSAKLFVGDPPAFDETRTSRPYKW
AQHLAGIDFLPEIAPLLSGHETANSEATKNEVIVSGLSLYRQQNRVQTVVQRIRSRKRAQ
LALVEQLDSLVKLKWPCLNCENVPWALHTPLCNLNGWSPAGPPPNQTSSVPVIDTDQVQE
PMDADVDRRSRTSKEESESAREDGELPSLVASIVNDVKLTPSKISNLEHSRQLALISKSI
ISPINKTKSLSFKKHDEDSDMLLDIDSDLDELAPLELEAENEACHKIVENPWVDYGVKEY
SLVLTRRNIKLEAKIKISMEYPLRPPLFAVSLSSSGENHVESDGSEWCNELRAMEAEVNL
FMLRMLPLDQENYILSHQVGYLAMLFDYLMDDASPCEKRSTSVVDVGMCKPVSGRLLARS
FRGRDRRKMISWKDTECTSGYPY
NT seq 2412 nt   +upstreamnt  +downstreamnt
atggaggacggagagatagtggagggagtggcgatggaagaggatgcacagttaacaacg
cagcctaagaatgggaagtcaccctacgaaatgctgcgagaaggcaaagtctcagtggag
gaaatcgtagcccagattctcaccataaagaaagaaaacaagcctaaatcggagctccgc
gaactcgtcacccaaatttttctccacttcgtcactctccgccaggcgaaccgctcgatt
ctattggaagaggatagagtgaaagcggagacggaacgtgcaaaggcgccggtggatttc
acgactttgcagcttcataatttgatgtatgagaagagccactatgttaaagctataaaa
gcttgtaaagatttcaagtctaaatatcctgatattgagcttgttccggaagaagaattt
ttccgtgatgcgcctgaaaatatcaaaggtcctgttttgtctgacgatacttcacataat
ttgatgctcaagaggctcaattatgagctgcaccagcgcaaggaactgtgcaaacttcat
gagaaactggaacaacgtaagaaaagtttgttggagaccattgcaaaccggaagaagttc
ttatcaagtctcccctcacacctcaaatcactcaagaaggcatccttgcctgtacagaac
caattaggggttctgcatacaaagaaattaaagcagcaaaactcagcagagttacttcct
cctcctctttatgtgatttacacacagttcctggcacaaaaggaagcctttggagaacat
attgatctggagattgtggggagtctgaaagatgctcaagcttttgcccgtcagcaggca
aataaagatacaggcatatcttccactgtagagagttccaggttggaggatgatgcacct
gacgaggaagatgatggccagagaaggagaaaacggccaaagagggttccaagcaaggag
agtctggaccatgtaggagtattgcaagttcatccacttaagatcatactccatgtatat
gatgatgaggtttccgatccaaaatctgcaaagcttatcactttgaagtttgaatacttg
ttcaagttgaatattgtttgtgttggggttgagggatctcatgaaggacctgagaataac
atcttatgcaacttatttcctgatgacactggtgttgagcttcctcatcagtcagctaag
ctctttgttggagatccccctgcatttgatgaaactagaacttcacgtccttataagtgg
gcgcagcatttggcagggattgatttcttacctgagattgcgccattgcttagtggccat
gaaactgcaaacagtgaagcaacaaaaaatgaagttattgtatctggtttatcgctatat
cgtcaacaaaatcgggtgcaaactgtcgtgcaaagaattcgttctcggaaaagggctcag
ctggctcttgtggaacagcttgattcacttgtgaagcttaaatggccttgtttgaattgt
gaaaatgttccatgggctttacatactcccttatgcaatttgaatggttggtcacctgct
gggcccccacccaatcagacttcatctgtgcctgtcattgacacagatcaagttcaggaa
cccatggatgctgatgtggaccgaagatctcgtacttcaaaggaagagtcagagagtgct
agggaagatggagagcttccatccttggttgcttctattgtgaatgatgttaagcttact
ccttcaaaaatatctaatctagagcatagcaggcagctggctttaatttcaaagagtatt
atatcccctattaataagacgaaatcactaagtttcaagaaacatgatgaggattccgat
atgttgctggacattgatagtgatctggatgagcttgcaccactcgagctagaagcagaa
aatgaagcttgccataagatagtcgaaaacccatgggtggattatggggttaaagaatat
tctcttgtcttaacaaggaggaatattaagttagaagcaaagattaaaatcagcatggag
tatcctcttaggcctcctctttttgctgtgagtcttagctctagtggagaaaatcatgtt
gagagtgatggctctgaatggtgcaatgaactccgtgccatggaagcagaggtcaatctt
ttcatgctaaggatgctacctttggatcaagaaaactatatcttatctcatcaggtgggc
tatctagcaatgttgtttgactatttaatggatgatgcatctccatgtgaaaaaaggagt
acttctgtggttgatgttggcatgtgtaagcctgttagtggtaggcttcttgccagatca
tttagaggaagggatcgcaggaagatgatatcctggaaggacacggaatgcacttctggt
tatccatactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system