KEGG   Hevea brasiliensis (rubber tree): 110646812
Entry
110646812         CDS       T05150                                 
Name
(RefSeq) ATP-dependent RNA helicase DEAH13 isoform X1
  KO
K14780  ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6]
Organism
hbr  Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:hbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hbr03009]
    110646812
Enzymes [BR:hbr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     110646812
Ribosome biogenesis [BR:hbr03009]
 Eukaryotic type
  90S particles
   Helicases
    110646812
SSDB
Motif
Pfam: OB_NTP_bind HA2_N Helicase_C HA2_C DEAD AAA_22 AAA_19 nSTAND3 ResIII ATPase
Other DBs
NCBI-GeneID: 110646812
NCBI-ProteinID: XP_021656061
Position
Unknown
AA seq 1317 aa
MEVQMENSCLEGDSNALVLPAKKRNKRKGINQENEGVQKKKNPKLSKSQERKLKKLEQEK
EKAFLLAKSIETLEKYKIPEDAFSLLRSSRNISRVETVREKRRMAVQFSKAGLEVSHGDQ
PFKMCTDGASCKIEVESKSINWLSMNKNDHLQPMVRETEVDASDSLAISQELVSYCKQLN
SNSGSVSGFSSEEVPSEEDSIGFSPTSCCHDTRKTSHLMVKSDESSIAALGGTRNVLKCY
FQSPIASPTVVHVVRPNAVEEQRKDLPIVMMEQEIMEAINGHSTVIICGETGCGKTTQVP
QFLYEAGFGSKQSVARGGIIGVTQPRRVAVLATARRVAYELGLHLGKEVGFQVRHDKRIG
DSCTIKFMTDGILLREAQNDFLLKRYSVIILDEAHERSVNTDILIGMLCRAIPLRQKIYE
DQQQMLLSGQSINPENMVFPLKLVLMSATLRVEDFVSGRRLFHNPPVIEVPTRQFPVTVH
FSKRTEIVDYIGQAYKKVLSIHKRLPQGGILVFVTGQREVEFLCQKLRKASKKLIANTAE
GNIRNEASATPEMSSIEEINMKDINEAFEIQGNSTNEQTDRFSSYEKELPYPNEDESDVS
YNSETESEIEIVGDDGDSGDQSISENDGNLLGVLGEGSLTALRAAFEVLAGKNASDPNSE
GKHNPSMPEDLLEQSNHIVAKKNGGDKSVSVGALCVLPLYAMLPAAAQLRVFEGVKEEER
LVVVATNVAETSLTIPGIKYVVDTGREKVKNYNPSNGMETYEIQWISKASAAQRAGRAGR
TGPGHCYRLYSSAVFNNIFPDFSCAEISKVPVDSIVLVLKSMSINKVANFPFPTPPEATA
LVEAEKCLKTLEALDDSGRLTPLGKAMAHFPMSPRHSRMLLTVIQIMRKVKNYARANLVL
GYAVAAAAALSLTNPFLMEFVGSHDNSNGLEQDGISDSLGNEINLDKQEKLRRKKLKEMA
KLSRAKFSNPTSDAMTIAYALQCFELSNNPVEFCTENALHLKTMEEMSKLRKQLLQLVFN
QNVNHGFDQEFSWIHGTVGDVEQAWRVSFSKNPLLLNEEELLGQAICAGWADRVAKRIRG
DSKSSEGDRKVNSVRYEACGVKEIVFLHRWSSLSNSAPEFLVYSELLRTKRPYIHGATSV
KSEWLVKYARSLCSVSTVEDPKPFYDPQTDQVYCWISPTFMPRLWQLPLYSAPVGNDVER
VRVFAYALLEGHVLPCFRSVRNFMAARPSIILDREAVGGRRVGNLLFKLEAKLIDSCAML
REVWKENPDELHLEILHWFKKSFHNHFGTLWSQMHVEVQLGPHERFPKKMKDKRKEH
NT seq 3954 nt   +upstreamnt  +downstreamnt
atggaagtgcaaatggaaaattcatgtttggaaggtgatagcaatgcattggtcttgcct
gcaaagaaacgtaataaaaggaaaggcataaatcaggagaatgaaggggtccaaaaaaag
aaaaaccccaagttgagcaaatctcaggaaagaaagttaaagaaattggagcaggagaag
gagaaagcatttttactagcaaaaagcattgagaccttggagaagtacaagataccagag
gatgccttttcacttctgcgatcatcaagaaatataagtcgagttgaaactgtgagagaa
aaacgcaggatggcagtacaattttccaaggcaggtcttgaagtttcacatggtgatcaa
cctttcaaaatgtgtactgatggtgcttcttgcaagattgaagttgaatcaaaaagcatt
aactggctgagtatgaacaagaatgaccatttgcagccaatggtaagagaaacagaagtt
gatgcatctgattcattggctatctctcaagagttagttagttactgcaagcaactcaac
tcaaacagtggatctgtttctggcttctcgtctgaagaagttcccagtgaagaagactct
ataggtttttcaccaacttcatgttgtcatgatactaggaaaacctctcacttaatggtt
aaatcagatgagagctcgattgcagctttgggagggactcgcaatgtactgaaatgttat
tttcaaagtcctattgcctctccaacagtagtgcacgttgtaaggcccaatgccgtagaa
gagcaaaggaaggatcttccaatagttatgatggaacaggagataatggaagctataaat
gggcattccactgttattatctgtggagaaacagggtgtggaaaaactactcaagttcct
cagttcctttatgaagcaggctttggttcaaaacagtctgttgcccgaggtggtattatt
ggagttactcaaccacgccgtgtcgctgtccttgccacggctaggcgtgtggcatatgaa
cttggtcttcatcttggtaaggaggttgggtttcaagtaaggcatgacaagagaattgga
gacagttgtacaatcaaatttatgactgatggaattttactacgagaagctcagaatgat
tttttattgaaacgatactctgttataatcctggatgaggctcatgagagaagtgtgaac
actgacatactcattggcatgctttgccgtgccattccactccggcagaagatatatgag
gaccagcaacaaatgttgctttctggccaaagcattaaccctgaaaatatggtatttcca
ctcaaacttgttctgatgagtgccaccttgcgagtggaagattttgtttctggaagaagg
ttatttcataatcctcctgttattgaagttcccaccagacaatttccagtaactgtgcat
ttctcaaagagaacagaaattgtggactatattggccaggcttacaaaaaggtcttgtca
atccacaagaggctgccacagggaggcatacttgtctttgtcacagggcagagagaggtg
gagttcttgtgccagaaattgcgtaaagcttcaaagaaactgattgccaatactgctgaa
gggaatataaggaatgaggcctctgctacacctgaaatgagttctattgaggaaattaac
atgaaggacatcaatgaggcctttgagattcagggtaactcaactaacgagcaaactgat
agatttagttcctatgagaaagagttgccatatcctaatgaggatgaatcagatgtctct
tataattccgaaacagagagcgaaatagaaattgttggtgatgatggggattcaggggac
cagagcatctcagaaaatgatggtaaccttttaggtgttttaggcgaggggagtcttaca
gctctgagggctgcttttgaagtgttggccggaaagaatgcatcagaccctaattctgag
ggaaaacataatccatctatgccggaggacctcttggagcaatccaaccacattgtagcg
aagaagaatggaggagataaaagtgtctctgttggtgctttgtgtgttctgcctctttat
gccatgcttcctgcagctgcacagctccgggtttttgaaggagtcaaggaagaggagcga
cttgttgttgttgccactaatgttgctgaaacctctttaactatcccaggcataaagtat
gttgttgatactggtagggaaaaggtgaagaactacaacccctctaatggcatggaaaca
tatgaaatacagtggataagtaaggcatcagctgctcaacgtgcaggaagagctgggaga
actgggccaggtcactgttaccgcctctattcatctgcagtctttaataacatatttcct
gacttctcttgtgctgagatctctaaagtgcctgttgatagcattgttcttgtcctgaag
tccatgagtattaataaggttgcaaatttcccatttccaactcctccggaggccactgcc
ttggtagaagcagaaaaatgcttgaagactcttgaagcacttgatgacagtggaagattg
acaccccttgggaaggccatggctcattttcccatgagcccccgccactctaggatgctt
cttactgttatccaaattatgaggaaggtgaaaaactatgctagagcaaatctggtcctg
ggatatgcagttgcagcagctgcagcattgagcttgactaatccttttctgatggagttt
gtaggaagtcatgataatagcaatggcttagagcaggatgggatatctgacagcctaggc
aatgagataaacttggacaagcaggaaaaattaaggagaaagaaacttaaagaaatggct
aaattatctcgtgcaaaattttctaatcctaccagtgatgctatgactatagcttatgca
ttgcaatgttttgaactttcaaacaacccagttgaattctgcactgaaaatgccctacac
cttaaaaccatggaagaaatgtccaagctaagaaagcagcttcttcaactagtctttaat
caaaatgttaatcatggctttgatcaggagttttcatggatacatggaactgtgggggac
gtagaacaagcttggagggtgtccttcagtaagaaccctcttttactcaatgaggaagag
ctcttaggccaagctatctgtgccggctgggctgatagagttgccaaacgaatcagagga
gattcaaagtcatctgaaggagatagaaaagtaaattcagttcggtatgaggcctgtggg
gttaaagaaatcgtgttccttcatcgttggtcatctctttctaattcagctcctgagttt
ttggtgtacagtgaattgctgcggacgaaacggccatacattcatggagcaacaagtgtg
aaatcagaatggcttgtcaaatatgctaggtctttgtgtagtgtttctactgttgaggac
cccaaacctttttatgaccctcaaactgaccaagtatattgttggatcagtccaactttt
atgcctcgtctgtggcagctgccactgtacagtgcgccagttggcaatgatgtagaacgt
gtgagggtgtttgcttatgccttacttgaaggccatgttttgccctgctttagatctgta
cggaattttatggcagctcgtcctagtatcattttggatagagaagctgtaggtggaagg
cgagttgggaatcttttatttaagttagaggccaagttgattgatagttgtgccatgtta
agagaggtatggaaagagaatcctgatgagctgcatttggaaattttacactggtttaag
aagagctttcataatcattttggaacgctttggtcacaaatgcatgttgaagttcaatta
gggcctcatgaacgctttcccaagaagatgaaggacaaaaggaaagagcattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (10)   
   Pfam (10)   
All databases (26)   

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