KEGG   Hevea brasiliensis (rubber tree): 110648481
Entry
110648481         CDS       T05150                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
hbr  Hevea brasiliensis (rubber tree)
Pathway
hbr03018  RNA degradation
hbr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hbr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110648481
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110648481
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hbr03019]
    110648481
   03041 Spliceosome [BR:hbr03041]
    110648481
Messenger RNA biogenesis [BR:hbr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110648481
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     110648481
Spliceosome [BR:hbr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    110648481
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 110648481
NCBI-ProteinID: XP_021658422
Position
Unknown
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAIEYLRDPDDPLKT
TGQTRRLGLIVCRGTAVMLVSPTEGTDEIANPFMQPDGA
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtcaggaaggaaagaaactgtgttggatttggcaaaatttgtggataagggtgtccaa
gtcaagctcactggtggtagacaagtgacagggactctgaaagggtatgatcaattgtta
aatcttgtcctggatgaagctatagaatatctaagagatcctgatgatccactgaagacc
actggccagaccaggcgccttggcttaatagtttgcaggggaactgctgtaatgctggtc
tcaccaactgaagggacagatgaaattgccaaccctttcatgcagccagatggggcatag

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