KEGG   Hevea brasiliensis (rubber tree): 110653631
Entry
110653631         CDS       T05150                                 
Name
(RefSeq) DNA mismatch repair protein MSH6
  KO
K08737  DNA mismatch repair protein MSH6
Organism
hbr  Hevea brasiliensis (rubber tree)
Pathway
hbr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    110653631
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hbr03400]
    110653631
DNA repair and recombination proteins [BR:hbr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     110653631
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor
Other DBs
NCBI-GeneID: 110653631
NCBI-ProteinID: XP_021665047
Position
Unknown
AA seq 1293 aa
MAPARKPSNGRSPLVNPQRQITSFFSKATSPSPLPASTLSKEQTPKYNPNPKPPSPSPST
PSPLQTKIKKPRLVIGQTPSPSPSPSLSTPATTTKSYDKEVVDKRIRVYWPLDKRWYEGC
VKVYDKDSGKHLVQYDDFEEEMLDLGMEKIEWVEETVKKFKRLRRGSLAFKKTVIEDENE
EMKDVCNVEEENDGDDSSDEDWGKNPEMDLSDEDDMELEDEEEEDNIKVDKKEKQSGKSE
SRKRKACGAGKLGCGKKSEVVGDVSKEELKVSIMEQVKTEGTGLSNGLGDALTSDASERF
SARETEKLWFLGAERTDAKRRRPGDANYDPRTLYLPPNFVKSLSGGQRQWWEFKSKHMDK
VLFFKMGKFYELFEMDAHIGAKELDLQYMKGEQPHCGFPERNFSMNVEKMARKGYRVLVI
EQTETPEQLELRRKEKGSKDKVVKREICAVVTKGTLTEGELLTANPDASYLMGVTESRQN
LENKNFERVFGICVVDVATSRILLGQFEDDAECSSLCCLLSELRPVEIIKPAKMLSSETE
RVMLRHTRNPLVNELVPISEFWDSEKTVCEVKAIYKRITGQSAPGFLNKADTDTAELHVA
EDGSSCLPDILSELVNKGENGSLALSALGGTLYYLKQAFLDETLLRFAKFESLPCSDFCN
VAQKPYMILDAAAMENLEIFENNRNGGSSGTLYAQMNHCVTAFGKRLLKTWLARPLYHLK
SIKDRQDAVAGLRGANQPMALEFRKALSRLPDMERLLARICASSEANGRNSNKVILYEDA
AKKQLQEFITALRGCELMAQACSSLCVILESVESRQLHHLLTPGEGLPDIHSILKHFKDA
FDWVEANNSGRIIPHDGVDLEYDSACKKVREIESSLTKHLKEQRKLLGDTSISYVTVGKE
AYLLEVPEHLRGSIPRDYELRSSKKGFYRYWTPSIKKLLGELSQSESEKESTLKSILQRL
IGRFCEHHDKWRQLVSTTAELDVLISLAIASDFYEGPACRPVIMGSSSSEVPQISAKSLG
HPVLRSDSLGKGAFVPNDISIGGSDGASFVLLTGPNMGGKSTLLRQVCLAVILAQVGADV
PAGSFELSPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLSSATRNSLVALDELGRGTS
TSDGQAIAEAVLDHFVHEVQCRGMFSTHYHRLAVDYQKDPKVSLCHMACQVGTGVGEVEE
VTFLYRLMPGACPKSYGVNVARLAGLPDSILEKAAAKSREFEAVYGKHRNTSDEMVVFIQ
NLIDVAANLSCHSFDSNLFNKLQHRARVLLQQN
NT seq 3882 nt   +upstreamnt  +downstreamnt
atggcaccggcgcgtaaaccaagcaatggcagatcaccgctggtcaatccacagcgccaa
atcacttcttttttctctaaagcaacctctccttctccacttcccgcctctactctctcc
aaagaacaaacccccaaatataaccctaaccctaaacctccgagccctagcccttctact
ccttctcctctacaaaccaaaataaaaaaaccacgcctagtcattggccaaacgccctcc
ccatctccatcgccgtctctgtcaacacctgcaaccaccactaagtcgtacgacaaagag
gtggtggataagagaattagggtttactggccgttggataagagatggtacgagggttgc
gttaaagtttatgataaggattctggtaagcatttggttcagtatgatgatttcgaagag
gagatgttggatttgggaatggaaaaaattgagtgggttgaggaaactgtgaagaaattt
aagcgcttacgaaggggttctttggctttcaagaagacagtgattgaagatgaaaatgaa
gagatgaaagatgtctgtaatgttgaagaagaaaatgatggtgatgattctagtgatgaa
gattggggaaagaatccagagatggacctcagtgatgaggatgatatggagttggaggat
gaggaagaagaggataatatcaaggttgacaaaaaagaaaagcagagtgggaagagtgaa
tcaaggaaaaggaaggcctgcggagctggaaagctgggttgcgggaagaagagcgaggtt
gttggggatgtgagtaaagaagaattgaaagtttcaattatggagcaagtgaagactgaa
ggaactgggttgtctaatggccttggtgatgctttgacaagtgatgcttctgaaaggttc
agcgcacgtgaaactgagaaattgtggtttcttggagcagagcggacggatgcaaaaagg
aggcgccctggagatgcaaattatgatccaaggactttgtacctgcctccaaattttgta
aagagtttatcaggtggtcagaggcaatggtgggagttcaaatcaaagcatatggataaa
gttttgtttttcaagatgggcaagttttatgagctttttgaaatggatgcccacatagga
gctaaggaattagatttgcaatatatgaagggagaacaaccacattgtggttttccagag
aggaacttctcaatgaacgtggagaaaatggcaagaaagggttatcgagttcttgttata
gagcagacggaaacacctgaacaactggaacttcgtcgcaaagagaaaggttctaaagac
aaggttgtgaaacgtgaaatatgtgcagtggttacaaaaggaacactaactgagggagaa
ttacttacagcaaatcctgatgcttcttatctaatgggagtgactgaaagccgtcagaat
ttggaaaacaaaaattttgagcgggtttttggtatctgtgtggttgatgttgctaccagc
agaatccttcttgggcagtttgaggatgatgcagaatgcagctcattgtgttgtctgtta
tctgagctgaggccagtagaaattataaaacctgcaaaaatgctcagctctgaaactgag
agagtaatgttaaggcatacgagaaatcctttagtaaatgagttggttcccatctcagaa
ttctgggattctgagaaaactgtttgtgaagtcaaggccatctacaagcgtatcactggt
caatcagctcctggatttttgaataaagcggatacagatacagcagaacttcatgttgca
gaagatgggtcaagctgcctgccagatattttgtcagagctagtaaataaaggagaaaat
ggcagcctagcactttcagctcttggaggaactctctattatctaaaacaggcttttctg
gatgagactttgcttagatttgcaaagtttgaatcacttccatgctctgatttctgcaat
gttgctcaaaaaccatatatgattcttgatgctgctgcaatggagaatcttgagatcttt
gagaataacagaaatggaggctcttcagggacactttatgcacaaatgaatcattgtgtg
acagcatttgggaagaggttgctgaaaacatggctagcaagacctctatatcatttgaaa
tctattaaggatcgccaggatgctgtagcaggtctacggggggcaaatcaacctatggca
ctggaatttcgaaaagcattgtccaggcttcctgacatggagcgattacttgcacgcata
tgtgctagcagtgaagctaatggaagaaattcaaataaggtaattttatatgaggatgca
gcaaagaagcagctccaggagttcataactgctctacgtggctgtgaattaatggcccaa
gcatgttcctcactttgtgtcattttggaaagtgttgagtctaggcaactacatcatttg
ttaacacctggtgaaggtcttcctgatatccattcaattcttaaacattttaaggatgcc
tttgattgggtggaggccaacaattctggacgtataatacctcatgatggagtagatctg
gagtatgactctgcttgtaaaaaagttagggaaattgagtcgagtttgacaaaacacctt
aaggaacagcggaagttacttggagacacatcaatcagttacgtcacagttggaaaagag
gcatatctattagaagttccagaacatttgcgagggagtattcctcgagattatgagttg
cgttcatccaaaaagggattttacaggtattggactccaagcattaagaagctcttagga
gagctctcacagtctgaatctgaaaaggagtcaacattgaagagcattttgcagagattg
atagggcgtttctgtgaacatcatgataagtggagacaactggtttcaacaacagcagaa
ctggatgttttgattagtttggcaattgcaagtgacttttatgaagggccagcatgccgt
ccagtcatcatgggttcatcgtcaagtgaagtgccacagatatctgcaaaaagtttgggt
caccctgttcttagaagtgattctttaggcaagggtgcatttgtgccaaatgacatcagt
attggtggtagtgatggtgccagctttgtccttctgactggtcctaacatgggtggaaag
tctactcttctccggcaagtttgtttagctgtgattttggcccaggtaggggctgatgtc
cctgctgggagctttgaattgtcacctgtcgaccgaatatttgtccgaatgggtgcaaaa
gatcatattatggcaggtcaaagtacattcttgacagagctttcagaaactgcattgatg
ctgtcatcggccactcgtaattcattggtggcactggatgaacttggacgtggcacatca
acatcagatggacaagcaatagcggaagcagtacttgatcattttgtccacgaggtgcag
tgtcgaggaatgttttcaactcactatcatcgattagctgtagactatcagaaagatccc
aaggtctcactctgccacatggcatgtcaagttggaactggggttggagaagtggaggaa
gttacatttctatataggttgatgcctggtgcatgccctaaaagctatggtgtcaatgta
gcaagactggctggactccctgattctatactagaaaaagctgctgcaaaatccagagaa
tttgaggctgtatatggcaaacacagaaatactagtgatgagatggtagtcttcatccaa
aatttgattgatgttgctgcaaacttgagttgccatagttttgatagcaacttgttcaat
aaacttcagcatagagccagggtacttctgcagcaaaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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