KEGG   Hevea brasiliensis (rubber tree): 110661676
Entry
110661676         CDS       T05150                                 
Name
(RefSeq) endoribonuclease Dicer homolog 1-like
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
hbr  Hevea brasiliensis (rubber tree)
Brite
KEGG Orthology (KO) [BR:hbr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hbr03036]
    110661676
Chromosome and associated proteins [BR:hbr03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    110661676
   microRNA pathway
    RISC loading complex
     110661676
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer dsrm DND1_DSRM Helicase_C PAZ DEAD ResIII SNF2-rel_dom Dicer_PBD Dicer_dsRBD SWI2_SNF2
Other DBs
NCBI-GeneID: 110661676
NCBI-ProteinID: XP_021676063
Position
Unknown
AA seq 1981 aa
MTDGDSRVSGTVGGGCPSYWLDACEDISCDLIDNFVDFDTSIVQDSVDDTSNQDNLVNDF
FGGIDHILDSIKNGTGLPTLADGNSINNGTSAIVGNGIQDCNIGEGLFKNEAVEFCTNGE
KSSSLQLNGSNKNNFESKVLVVNFDNGSNPLDGRAEDRLNSLDNSVKENGNKGGLEGPRE
RDFDSEERYCKKARITSSYKNERQYSSRGQYDPRDRERSSNRKRLRDWDDIDRRDKYHNR
RRDRYNGRRDGRDRDWRDREPRGYWERDRSGSNEMIFHSGSWEADHNKEGKESNDKDEEC
NGKPEKKSEETKEKFPEEQARQYQLDVLEQAKKRNTIAFLETGAGKTLIAVLLIKSLYND
LQRQNKKMLAVFLVPKVPLVYQQAEVIREHTSYQVGHYCGEMGQDFWDARRWQPEFESKQ
VLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPSVF
GMTASPVNLKGVSSQVDCAIKIRNLESKLDSIVCTIKDRKELEKHVPMPAEIVVEYDKAA
SLWSLHEQIKQMEVAVEEAAQSSSRRSKWQFMGARDAGAKEELRQVYGVSERTESDGAAN
LIQKLRAINYALGELGQWCAYKVAQSFLMALQNDERANYQLDVKFQESYLEKVVLLLQCQ
LTEGAVTDKDTKSNDNENGVAQDGTDPDDIEEGELPDSHVVSGGEHVDVIIGAAVADGKV
TPKVQSLIKILLKYQYTEDFRAIIFVERVVAALVLPKVFAELPSLSFVRCASLIGHNNSQ
EMRTSQMQDTIAKFRDGRVTLLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYIQSRGRAR
KPGSDYILMVERGNLSHGAFLRNARNSEETLRKEAIERTDLSHLKDTSRLISVDTIPGTV
YQVESTGAIVSLNSAVGLIHFYCSQLPSDRYSILRPEFIMERHEKPGGPTEYSCKLQLPC
NAPFEKLEGPVCSSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGSGEEREKTDQNDEGE
PLPGTARHREFYPEGVANILQGEWILCGRDGCNNSKLLKLYMYAVRCVNSGTSKDPFLTQ
VSDFAVLFGNELDAEVLSMSMDLFIARTIITKASLVFRGPINVTETQLASLKSFHVRLMS
IVLDVDVEPSTTPWDPAKAYLFVPMVGDKFVDPIKEIDWDLVEKIIRTDVWSNPLQRARP
DVYLGTNERTLGGDRREYGFGKLRHGMAFGQKSHPTYGIRGAVAQFDVVKASGLVPNRDG
TETEKVGLPKGKLMMADTCVDAEDLVGRIVTAAHSGKRFYVDSIRYDMTAENSFPRKEGY
LGPLEYSSYADYYKQKYGVELIFKQQPLMRGRGVSYCKNLLSPRFEHSESNEGESEEILD
KTYYVFLPPELCLVHPLPGSLVRGAQRLPSIMRRVESMLLAVQLKDMIDYSVPASKILEA
LTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQYA
LNKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKDGESSLFDQERLLSEDKPGVDHADDGY
QDDEIEDGELESDSSSYRVLSSKTLADVVEALIGVYYVEGGKNAANHLMKWIGIQVEFDH
EEVDSAIKPANVPESILRSVNFDALEGSLNIKFNDRGLLVEAITHASRPSSGVSCYQRLE
FVGDAVLDHLITRHLFFTYTNLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSAL
EKQIRDFVKEVQDELSKPGFNSFGLGDCKAPKVLGDIVESIAGSIFLDSGRDTAVVWKVF
QPLLHPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNLATVEVFIDGIQVGLAQNP
QKKMAQKLAARNALAVLKEKETAEAKEKGDENGTKKKNGNQTFTRQTLNDICLRRNWPMP
LYRCVNEGGPAHAKRFTFAVRVNTNDRGWTDECVGEPMPSVKKAKDSAAVLLLELLNKWY
S
NT seq 5946 nt   +upstreamnt  +downstreamnt
atgacggacggtgatagtagggtttcaggtactgtgggcggcggctgcccatcttactgg
ttggatgcctgtgaggacatttcctgtgatcttattgacaattttgtcgattttgatact
tcaattgttcaagattcagttgatgatacttcaaatcaggataatctcgttaatgatttc
tttggaggtattgatcacattcttgatagcatcaagaatggtactggcttacctacgctt
gctgacggcaatagtatcaataatggtacatcggctattgttgggaatggaattcaggat
tgtaatattggggaagggctctttaagaacgaggcagttgaattttgcacgaatggagaa
aaaagctcctcattacaattaaatggcagtaataaaaacaattttgaaagtaaggtgctt
gtggtgaattttgataatggatcgaatccgttggatgggagggccgaagataggttgaat
tcgttggataattctgtcaaggaaaatgggaataagggcggtcttgaggggccaagggaa
cgagactttgatagtgaagaaaggtactgtaaaaaggctaggattaccagcagttacaaa
aatgagagacagtactctagtagagggcaatatgatccaagggacagggagaggagctct
aacaggaagaggctgcgagattgggacgacattgataggagggacaagtatcataatcgg
agaagagataggtataacggtaggagagatgggagagatagggattggagggatagggaa
ccaaggggttattgggagagggaccgttctgggtccaatgagatgatttttcactcaggt
agttgggaagctgatcataacaaagaaggaaaggaaagcaatgacaaggatgaggagtgc
aatggaaagccagagaagaaatccgaggagaccaaggagaaattccctgaggaacaagcc
cgccaatatcaattggatgttcttgaacaggccaagaagagaaatacaatagcttttctt
gaaactggtgctgggaagaccctcattgctgtacttctaattaaaagtctttataatgac
ttgcaaaggcagaacaagaaaatgcttgctgtatttttggttccaaaggttccacttgtt
tatcagcaagcggaagtcattcgtgagcataccagctaccaagtgggccattattgtggt
gaaatgggccaagatttctgggatgctcggaggtggcagcctgagttcgaatcaaaacag
gttttagtgatgacagctcagattctgttgaacattctgagacatagcataatcaaaatg
gaagcaataaatctccttattctggatgagtgtcaccatgctgtgaagaaacatccatat
tctttagtgatgtcagaattctatcatacaacgccaaaggaaaaaagaccatctgttttt
ggaatgactgcttctcctgttaacttgaaaggtgtttcaagtcaagttgattgtgctata
aaaatccgtaatcttgaaagtaaacttgattccatagtttgtacaataaaagaccgcaag
gaactggaaaaacatgtgccaatgcctgcagaaatcgtcgtggagtatgacaaagcagcc
agcttatggtcccttcatgaacaaataaaacaaatggaagtggctgtcgaagaagctgca
caatcaagctcaagaaggagtaaatggcaatttatgggagctagagatgctggtgctaag
gaagagctgcgccaagtttatggtgtctctgaaagaacagaaagtgatggggctgctaac
ttgattcaaaagttgagggctatcaattatgcacttggtgaattgggtcagtggtgtgct
tacaaggttgcacaatcctttttgatggctttacaaaatgatgagagggcaaactatcag
cttgatgtcaagtttcaagaatcctatctggaaaaagttgttttgctcttacaatgccaa
ttaacagagggagctgtgacagataaggacacaaaatctaatgacaatgagaatggagtt
gctcaagatgggactgatcctgatgacattgaagaaggagagcttcctgacagtcatgtc
gtttccggtggggagcatgttgatgtgataataggggctgctgtagctgatggaaaagtg
accccaaaagtgcagtcattaataaaaatacttcttaagtatcagtacacagaggatttt
cgtgcaatcatctttgtcgagcgagtagtagctgctttagtccttcctaaggtatttgca
gagcttccatcactgagttttgttaggtgtgcaagcttgattggacacaataacagtcag
gaaatgcggacatcccagatgcaggacacaattgccaaatttcgagatggtcgtgtgaca
ctgttggttgctacaagtgttgctgaggaaggactagatattagacaatgcaatgttgtt
attcgctttgatcttgcaaaaactgttctggcatacattcagtctaggggtcgtgcaaga
aagcctggttcagattacatcttgatggttgagaggggaaatctgtctcatggagcattc
ttaagaaatgctaggaatagtgaggagaccctgcggaaagaagcaattgagagaactgac
cttagtcaccttaaggatacatcaaggttaatttctgtggatacaattccaggaactgtg
taccaggtggaatctactggtgctattgtgagcttgaattctgctgttgggcttatccat
ttctattgctctcagctaccgagtgacaggtattcaatacttcgtcctgagtttattatg
gaaaggcatgagaagccaggaggtcccacagaatattcatgcaagcttcaacttccttgt
aatgcaccatttgagaagcttgagggtcctgtatgcagttcgatgcgccttgcacaacag
gctgtttgtttggctgcttgcaagaagctccatgagatgggagcatttactgacatgctc
ttgccagataagggaagtggggaagaaagagaaaagactgaccagaatgatgaaggtgaa
ccgcttcccggaactgctaggcatagagagttctatcctgaaggtgtagcgaatatactc
cagggagaatggatcttatgcggaagagatggttgcaacaactccaaattgcttaaactt
tatatgtatgctgtaagatgcgtaaacagcggcacttcaaaagatccattcttaactcaa
gtttcagattttgcagtgctttttggcaacgagctggatgcagaggtgttatcgatgtca
atggatctatttatcgctcgaaccattataactaaggcatctcttgtcttcaggggtcca
ataaatgttactgaaacccagctggcatcccttaaaagttttcatgtgagattgatgagt
attgtactggacgtggatgttgaaccttccaccactccatgggatcctgcaaaagcatat
ttgtttgtccctatggttggcgataagtttgtagatcctataaaagaaattgactgggat
ctagttgaaaaaataattagaacagatgtgtggagcaatccccttcagagggctcgacca
gatgtttaccttggtacaaatgagagaacacttggtggagatagaagggagtacggattt
gggaaattgcgtcatggcatggcttttggacagaaatcccatcccacctatggtatcaga
ggagctgtagcacaatttgatgttgtgaaagcttctggactggttcctaatcgggatgga
actgaaacagagaaagtggggttgcccaaaggcaaactgatgatggctgatacttgtgtt
gatgctgaagatttggtagggagaattgtaacagccgcgcactctgggaaaaggttctat
gtggattcaatacgctatgacatgactgcagagaactcatttccaaggaaagagggttat
cttggtcctttagagtatagctcatatgctgattattataagcaaaagtatggagttgaa
ttgatatttaagcaacaaccattaatgagaggacgcggtgtttcatactgcaagaatctt
ttatctcctcggtttgaacactcagaatcaaatgaaggtgaatctgaagaaattcttgac
aaaacatattatgtttttcttcctcctgagctatgtttagtacaccctcttcctggatca
cttgttcgaggtgcccaaagattgccatcaataatgaggagggttgaaagcatgctgctt
gcagttcaacttaaggatatgatagattattcagtccctgcttcaaagatcttggaagcc
ttgactgcagcttcatgccaagagacattctgctatgagagagcagaacttctaggagac
gcttatctgaaatgggttgtcagtcgatttctttttcttaaatatccccagaaacatgag
ggtcaactcactaggatgagacaacaaatggtgagtaacatggttctgtatcaatatgca
ttaaataaaggacttcaatcatatatccaggcagatcgttttgctccctctagatgggct
gctcctggggtgttgcctgttttcgatgaggatacaaaggatggagaatcctccttattt
gatcaggaaagattgctttctgaggataaaccaggagtggatcatgctgatgatggatat
caagatgatgaaattgaggatggtgaacttgagagcgactctagttcttatagagttctc
tctagcaagacattggcagatgttgttgaagcattgattggtgtttattatgttgaaggt
ggtaagaatgcagcgaaccacctcatgaaatggattgggattcaggtagagtttgaccat
gaagaggtagattcggcaataaagccagccaatgttccggaaagtatacttaggagtgtc
aattttgatgccttagaaggttccttgaacattaagttcaatgaccggggcctcttggtt
gaagcgatcactcatgcgtcgcgaccatcttctggagtatcctgttatcaacgattagaa
tttgttggtgatgcagtcttagatcatctgattacaaggcacttgtttttcacatacaca
aatcttcccccaggtcgcttgacagatttgcgagctgctgctgtaaacaatgaaaacttt
gcacgtgttgctgttaaacataagctccatgtgcatcttcggcatgggtcaagtgctctg
gaaaagcagattcgtgattttgtgaaggaagttcaagatgaattatcaaaacctggtttc
aactcctttggtttgggagattgcaaagctccgaaggttcttggtgacattgttgaatct
atagcaggttctattttcctagacagtggacgggatactgcagtcgtttggaaggttttt
caacctttgttgcacccaatggtcactccagaaacactcccgatgcatcctgtcagggag
ctgcaagaacggtgccagcaacaggctgaaggcttggaatacaaagcctcaagaagtggc
aatctggctactgttgaagtttttattgatggtattcaggtaggacttgctcagaatcca
caaaagaagatggcacagaaacttgctgctaggaatgcgcttgctgttttgaaagagaag
gaaacagctgaagctaaagaaaaaggtgatgagaatggaacgaagaagaaaaatggcaac
caaacatttaccaggcagaccttaaatgatatttgcttgcgaagaaattggcctatgccc
ttgtatcggtgtgtgaacgagggtggccctgcacatgcaaaaaggtttacgtttgcagtt
cgtgtgaatactaatgataggggatggactgatgaatgtgtgggagagccaatgccaagc
gtcaaaaaggccaaggactctgctgcagttctcctcttggaacttttgaataaatggtac
tcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (22)   

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