KEGG   Hahella chejuensis: HCH_02163
Entry
HCH_02163         CDS       T00307                                 
Name
(GenBank) Bacterial nucleoid DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
hch  Hahella chejuensis
Brite
KEGG Orthology (KO) [BR:hch00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hch03032]
    HCH_02163
   03036 Chromosome and associated proteins [BR:hch03036]
    HCH_02163
   03400 DNA repair and recombination proteins [BR:hch03400]
    HCH_02163
DNA replication proteins [BR:hch03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    HCH_02163
Chromosome and associated proteins [BR:hch03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    HCH_02163
DNA repair and recombination proteins [BR:hch03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      HCH_02163
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_1 HU-CCDC81_euk_2 HU-DNA_bdg DUF2267
Other DBs
NCBI-ProteinID: ABC28992
UniProt: Q2SK32
Position
2215403..2215675
AA seq 90 aa
MNKSELIDAVAASADISKAAAGRALDAVVESVTEALKKGEQVTLIGFGTFSVKERAARTG
RNPQTGATIKIDAAKVPSFKAGKALKDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
gtgaataagtcagaattgattgatgctgttgctgcatctgcagacatctcaaaagcggct
gctggtcgtgctcttgatgctgtcgttgagtcagttactgaagcattaaaaaagggtgag
caggttactttgatcggttttggtacgttctctgttaaagagcgcgctgcacgcactggt
cgcaacccgcaaactggcgctacgattaaaatcgacgccgccaaagttcccagctttaaa
gccggtaaagctctgaaagacgcagtcaactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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