KEGG   Hahella chejuensis: HCH_05383
Entry
HCH_05383         CDS       T00307                                 
Name
(GenBank) uncharacterized host factor I protein
  KO
K03666  host factor-I protein
Organism
hch  Hahella chejuensis
Pathway
hch02024  Quorum sensing
hch03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hch00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HCH_05383
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HCH_05383
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hch03019]
    HCH_05383
   03036 Chromosome and associated proteins [BR:hch03036]
    HCH_05383
Messenger RNA biogenesis [BR:hch03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     HCH_05383
Chromosome and associated proteins [BR:hch03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    HCH_05383
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: ABC32052
UniProt: Q2SBC2
Position
complement(5519294..5519545)
AA seq 83 aa
MSKGQSLQDPYLNALRKERIPVSIFLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPARNVRIAAQGEGENEASNA
NT seq 252 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcagtctttacaagacccttatttaaatgcgctacggaaggaacgcatc
ccggtatccatattcctggtaaacggcatcaaactgcagggacaaattgaatcgttcgat
cagtttgtaattctgttgaaaaacaccgtcagccaaatggtttacaagcacgctatctcc
accgtcgtccctgcccggaacgtacgtatcgccgcgcaaggcgaaggagaaaacgaagca
tctaacgcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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