KEGG   Hahella chejuensis: HCH_06193
Entry
HCH_06193         CDS       T00307                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
hch  Hahella chejuensis
Pathway
hch03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hch00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HCH_06193 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hch03021]
    HCH_06193 (rpoA)
   03400 DNA repair and recombination proteins [BR:hch03400]
    HCH_06193 (rpoA)
Enzymes [BR:hch01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     HCH_06193 (rpoA)
Transcription machinery [BR:hch03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     HCH_06193 (rpoA)
DNA repair and recombination proteins [BR:hch03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      HCH_06193 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2 Hus1 DUF22
Other DBs
NCBI-ProteinID: ABC32837
UniProt: Q2S937
Position
complement(6332328..6333332)
AA seq 334 aa
MQRSLNEFLTPRTIEVNQINATHAKVTLEPLERGFGHTLGSALRRILLSSMPGCAVVEVE
IDGVLHEYSTVEGVQEDVIEILLNLKNLAIKMHNRDEATLSLNKKGAGPVLASDIQLDHD
VEIANPDMVICNLNSNGDVKMKLKVARGRGYEPADQRNSADDETRAIGRLQLDSSFSPVL
RVAYNVESARVEQRTDLDKLVIDLETNGTIDPEEAIRRAATILQQQLAVFVDFDQQNEPE
KVEEQEEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLENWPPASIRGDDRVLGG
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgcagcgttcattaaacgaatttcttacacctcgtactatcgaggtgaatcaaatcaat
gcgactcacgcaaaggtgaccctggagccgctcgaacgcggtttcgggcatactttagga
agtgcattacgccgcattttgctgtcttcaatgccgggttgcgctgtcgtcgaagttgag
atcgacggcgttcttcacgagtacagcaccgttgaaggtgtgcaggaagatgtgattgag
attcttctgaacttgaagaatctcgccatcaagatgcacaaccgcgatgaagcaacgttg
tccctgaacaagaagggcgctgggccagtactggctagcgatatccagcttgatcatgat
gttgagattgcaaatccagatatggttatttgcaaccttaactcaaatggcgacgttaag
atgaaactgaaagtggctcgtgggcgtggttatgagcctgcggatcaacggaactcagct
gatgatgagacaagagcaattggaagattgcagcttgactcctctttcagcccagtgctc
cgtgttgcttataacgttgaaagcgctcgggttgagcagcgtaccgatttggacaagttg
gttatcgacttggaaacaaacggaacgattgaccctgaggaagcaatccgtagggcggcg
acaattctgcaacagcagcttgctgtctttgtagattttgatcagcaaaatgagccagaa
aaagttgaagagcaagaagagatcgatccgattcttctgcggccggttgatgatttagaa
ctgactgtgcgttcagcgaactgcttaaaagctgagaacatctactatatcggtgatctc
attcaacgcactgaggtggagcttctgaagactcctaacctgggaaagaaatcattaacc
gaaattaaagacgtgcttgcttcacgcggcttgtctttaggtatgcgtcttgaaaactgg
cctcccgccagcattcggggcgatgatcgggtattaggcggctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (6)   
   Pfam (6)   
All databases (48)   

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