KEGG   Helicobacter cetorum MIT 99-5656: HCD_07470
Entry
HCD_07470         CDS       T02033                                 
Name
(GenBank) site-specific DNA methylase
  KO
K00558  DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
Organism
hcm  Helicobacter cetorum MIT 99-5656
Pathway
hcm00270  Cysteine and methionine metabolism
hcm01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:hcm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    HCD_07470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hcm03000]
    HCD_07470
   03032 DNA replication proteins [BR:hcm03032]
    HCD_07470
   03036 Chromosome and associated proteins [BR:hcm03036]
    HCD_07470
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hcm02048]
    HCD_07470
Enzymes [BR:hcm01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.37  DNA (cytosine-5-)-methyltransferase
     HCD_07470
Transcription factors [BR:hcm03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    HCD_07470
DNA replication proteins [BR:hcm03032]
 Eukaryotic type
  DNA Replication Termination Factors
   DNA methylation enzymes
    HCD_07470
Chromosome and associated proteins [BR:hcm03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    HCD_07470
Prokaryotic defense system [BR:hcm02048]
 Restriction and modification system (R-M system)
  Type II R-M system
   DNA methyltransferases
    HCD_07470
SSDB
Motif
Pfam: DNA_methylase TRM
Other DBs
NCBI-ProteinID: AFI06485
UniProt: I0EU66
Position
complement(1585097..1586314)
AA seq 405 aa
MKGNKYKIISLFSGCGGLDLGFIKEGFEVIWANDFFKEAVETYQKNIGSHIVYGDITKIP
SNDIPSECDILLGGFPCQGFSVANTKRSMEDKRNFLYKELLRLLRDKQPKFFVAENVKGL
LSMQKGQVIEMIVKDFKSLGYYVDYKLLKASDYGVPQHRERVIIIGNRLGLKNPFPKKTH
GLCNDLLNENLKPYVCVKDVVGHLADVRTRDASFMLDGVMIHNHIARTNVHDKFWGRKHS
IDQHEICDYLKFWRSQNTYSTKQIDEHFGYAHTAGHWFRKDNNSGSIPKAQDWWELKRLL
RFDDTYDKAVTEFELKEIKFEQSLRINNWELPSDTITATGPEIHPNKQRRMSVRECAIIQ
TFPNDFIFYGSLGNMYKQIGNAVPVLLAQKIAKEIFKELKNHDKS
NT seq 1218 nt   +upstreamnt  +downstreamnt
ttgaaaggcaataaatataagattattagtttattttctgggtgtggtggtttagattta
ggtttcattaaagagggttttgaagttatttgggcaaatgatttttttaaagaggctgta
gaaacttatcaaaaaaacattggttctcacattgtttatggtgatataacaaaaattcct
agtaatgacattccgagtgaatgtgatattttacttggaggttttccttgtcagggtttt
tcggtggccaatactaaacgctctatggaagataagagaaattttttatacaaagagtta
ctaagacttttaagagacaaacaacctaaattttttgtagctgaaaatgttaagggattg
ttatctatgcaaaaaggacaagtaattgagatgatagtaaaagattttaaatcgctaggc
tattatgtagattataagttattaaaggcatctgattatggtgtgccacaacacagagag
agagttattattattggcaatagattggggcttaaaaatccttttccaaaaaaaactcat
ggactatgtaatgatttattgaatgaaaatttaaagccttatgtgtgtgttaaagatgta
gtagggcatttagctgatgtaagaaccagagatgcaagttttatgcttgatggcgtaatg
atacataatcacatagcacgcactaatgtgcatgataaattttggggcagaaagcattct
attgaccagcatgaaatttgtgattatttgaaattttggcgttctcaaaatacttatagc
actaaacaaattgatgagcattttgggtatgcccatactgctgggcattggtttagaaag
gataataattcaggaagcattccaaaagcacaagattggtgggagttaaaaaggctttta
agattcgatgatacttatgataaagccgttacggaatttgaattaaaagaaattaagttt
gaacaatctttaagaattaataattgggagttaccaagcgataccattactgccacaggt
cctgagattcatcctaacaagcaaaggcgtatgtcagtaagagagtgtgctattattcaa
acttttcctaatgattttattttttatggaagtttagggaatatgtataaacaaattggt
aatgccgtacccgtattattggctcaaaaaattgcaaaagagatttttaaggagttaaaa
aatcatgataagtcttag

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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