KEGG   Halomonas chromatireducens: LOKO_01441
Entry
LOKO_01441        CDS       T04292                                 
Symbol
polB
Name
(GenBank) DNA polymerase II
  KO
K02336  DNA polymerase II [EC:2.7.7.7]
Organism
hco  Halomonas chromatireducens
Brite
KEGG Orthology (KO) [BR:hco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hco03400]
    LOKO_01441 (polB)
Enzymes [BR:hco01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LOKO_01441 (polB)
DNA repair and recombination proteins [BR:hco03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    LOKO_01441 (polB)
SSDB
Motif
Pfam: DNA_pol_B DNApolII_N DNA_pol_B_exo1 DNA_pol_B_2 P63C
Other DBs
NCBI-ProteinID: AMD00509
UniProt: A0A0X8HDC9
Position
complement(1509917..1512310)
AA seq 797 aa
MERQQGFVLTRHWRDTHAGTEVTFWLATDAGPCHVRLPAQPSVAFIPVEQRVQAEVLLHG
ERDVELRPLKLRDFQQRPVLGLYCRQYRQLMNLEKRLREAGIDVFEADVRPPERYLMERY
ITAPVWFADQETSRSALIKTQLKPAPEYRPRLRLASLDIETSERGDLYSIALEGCGQRQV
FMLGPANGGQAESGDAPESRDFSLLYCDDRKALLVRLNEWIARHDPDAIIGWNLVQFDLR
ILQRHAEQLGVPLLLGRGGEPMEWRAHGSNANHFFASAAGRLIIDGIEMLRQATWRFASF
SLEHVAQELLGEGKAIDSPYQRMDEINRMFAEDKPRLARYNLKDCELVTRIFAKTELIDF
LLERAAVTGLPADRSGGSVAAFSHLYLPRMHRLGYVAPNLAPRHGVGVSEESPGGFVMDS
RPGLYDSVLVLDFKSLYPSIIRTFLIDPVGLVEGLGEPEEDSVPGFRGARFSRTQHALPG
IVERVWQGREAAKRDCNAPLSQALKIIMNAFYGVLGSRGCRFFDPRLASSITLRGHAIMH
RTRELIEEKGYTVIYGDTDSTFVSLGGQRSEAEAGAIGRDLAASVNRWWNEHLASTLALE
SRLELQFETHYCRFLMPTIRGAEQGSKKRYAGLVRGEDGDESIVFKGLEAVRADWSPLAK
VFQQELYRLVFTLQPHREFVRDYVRRTLAGEFDERLVYRKRLRRRLDDYRRNVPPHVRAA
RLADEYNQQLGRPRQYQNGGWIRYVMTMAGPEPLETRRSPIDYHHYLSRQLQPVADAILP
FIGDDFSSLVDQQLGLF
NT seq 2394 nt   +upstreamnt  +downstreamnt
gtggagcgacagcagggtttcgtgttgacccgccattggcgggatacacacgcaggtacc
gaagttaccttctggctggcgaccgatgctggcccgtgccatgtgcgtctcccggcgcag
ccttcggtggccttcattcccgtcgagcagcgcgttcaggcggaagtcctgctgcatggc
gaacgggacgtcgagctgcgcccgctcaagctgcgtgatttccagcagcgcccggtgctg
gggctctactgccgccagtatcgacagctgatgaacctggagaaacggctgcgcgaggcc
ggtatcgatgtcttcgaggcggatgttcgtccacctgagcgctacttgatggagcgctat
atcaccgctccagtatggttcgcggaccaagagacttcccggagtgcattgatcaagacc
cagctcaagccggcgcctgagtaccggccacggctcaggctggcgtccttggacatcgag
accagcgagcggggtgatctctactccattgcccttgagggctgcggtcagcgccaggtc
ttcatgctggggccggcgaatggggggcaggctgagtcgggcgatgcgcccgagtcccgg
gacttttccctactctactgtgatgaccgcaaggcgctgctagtccgattgaatgaatgg
atcgcacggcacgacccggatgcgatcattggctggaacctggtgcagttcgatctgcga
atcctgcagcgccatgctgagcagctcggcgtgccgctgttgctgggccgtggcggcgag
cccatggagtggcgcgcccacggtagcaacgccaaccactttttcgcctcggccgctggg
cggctgatcatcgacggtatcgagatgctgcgccaggcaacatggcgtttcgcttcgttc
agcctggagcatgttgcccaggagctgttgggcgagggcaaggccatcgacagcccctac
cagcgcatggatgagatcaaccgcatgttcgccgaggacaagccccggcttgcccgttat
aacctcaaggattgcgagctggtcacgcgcatctttgccaagaccgagctgatcgatttc
ctgctcgagcgggccgccgttaccggcctgcccgccgaccggagcggcggctcggtggcg
gcattctcgcacctctacctgccgcgcatgcatcggcttggctacgtcgcccccaatctt
gcgccacgccatggcgtgggagtgagcgaggagagccccggcggtttcgtgatggactca
cggcccgggctctacgactcggtgctggtactggatttcaagagcctatatccctcgatc
atccgcaccttcctgatcgacccggtagggctggtggagggccttggtgagccggaggag
gatagcgtacccggcttccgaggggcccgtttttcacgcacacagcacgccctgcccggt
atcgtcgagcgggtgtggcagggccgagaggcggccaagcgcgactgcaacgcgcccctg
tcccaggcgttgaagatcatcatgaacgccttctatggtgtattgggttcccggggttgt
cgtttcttcgatccacggctcgcctcgtcgattaccctgcgcggccacgccatcatgcat
cggacgcgggagctcatcgaagagaagggatataccgttatctacggtgacaccgactcg
accttcgtctcgctcggcggccaaagaagcgaggcggaggccggcgccatcgggcgtgat
ctcgctgcgagcgtcaatcgctggtggaacgaacacctggcatcgaccctggctctggaa
agtagactggaattgcagttcgaaacccactactgccgcttcctcatgcccaccatccgc
ggtgccgaacagggcagcaagaagcgctatgccggactggtgcgcggagaggatggcgac
gagagcatcgtcttcaagggtctcgaggcagtgcgcgcggactggtctccactggccaag
gtcttccagcaggaactgtatcgtctggttttcaccctccagccgcaccgcgagttcgtg
agggactacgttcggcgcacgctggccggtgagttcgatgagcggttggtctatcgcaag
cggctgcgacgcaggctcgacgactatcgtcgcaacgtgccgccccatgtgcgtgcggcg
cggctggccgacgaatacaatcagcagctgggccggcccaggcaataccagaacggcggc
tggatccgctatgtgatgaccatggcgggtcctgagccactggaaacacggcgatcacct
attgactaccatcactacctgagccggcagctgcagccggtagccgatgccatcctgcct
ttcattggcgatgatttctccagcctggtcgaccaacagctggggttgttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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