KEGG   Helicobacter cinaedi PAGU611: HCN_2080
Entry
HCN_2080          CDS       T02034                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
hcp  Helicobacter cinaedi PAGU611
Brite
KEGG Orthology (KO) [BR:hcp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hcp03032]
    HCN_2080 (gyrB)
   03400 DNA repair and recombination proteins [BR:hcp03400]
    HCN_2080 (gyrB)
Enzymes [BR:hcp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HCN_2080 (gyrB)
DNA replication proteins [BR:hcp03032]
 Prokaryotic type
  DNA Topoisomerases
   HCN_2080 (gyrB)
DNA repair and recombination proteins [BR:hcp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HCN_2080 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3 TOPRIM_C
Other DBs
NCBI-ProteinID: BAM13223
UniProt: A0A809NLP7
Position
complement(2059285..2061603)
AA seq 772 aa
MEKKEYQASNIKVLKGLEAVRKRPGMYIGDTNSGGLHHMIYEVVDNSVDEAMAGHCDRIN
ITLTMEGSAIIEDNGRGIPVDIHPTENLPAATLVLTTLHAGGKFDQDTYKVSGGLHGVGV
SVVNALSKKLIMTIKKNGHIYRQEFAQGIPQSELEIIGETKEHGTIIEFYPDDEVMEVLE
FDSQILTRRFKEMAYLNHNITIYFKDERTGQEESYHFDGGLKQFIQDVNTKPLVSLIISF
EALEQETEVEIALAYNEGYDEKVLSFVNNIRTPDGGTHEAGFRAGLSRAIMNYIEANANA
REKDSKVTGDDVREGLVAIISTKVIDPQFEGQTKGKLGSAFVKPIVQKLTYEKLAKFFEE
NPTEARIIMQKAIMAARGREAAKKARDLTRKKESFSVGTLPGKLADCQSKDPSESEIYLV
EGDSAGGSAKQGRDRAFQAILPLRGKILNVEKSRLDKILKSDEIKNMITAFGCGIGDEFN
IEKLRYHKIIIMTDADVDGSHIQTLLMTFFYRYLKPLVENGHIYIAQPPLYRYKKGKTEI
YLKDERALSEYLVENGIGNFSFEGIGNKELLEVLKFIAHYRSILKELEKRYPMIDVVRYL
VENDSFDNLTLNELSQNIESYLQAKECNILNKITSEEQITLYVQTKVGLVELGINDSLFM
DNFFQEARFIYQKIADRDLDFLKGKNLIAFLEKIEESAKKDAYIQRYKGLGEMNPDQLWE
TTMTPANRTLLRVKIDNDADTDEIFTLFMGDEVEPRRAYIQEHAKDVKHLDV
NT seq 2319 nt   +upstreamnt  +downstreamnt
atggaaaaaaaagaatatcaagcaagtaatattaaagttttaaaaggcttagaagcggtg
cgaaaacgccccggaatgtatataggcgatacaaactctggtggtttgcaccatatgatt
tatgaagtggtggataactccgtagatgaagctatggcagggcattgcgatagaatcaat
attacactcacaatggaaggtagtgccattattgaggataatggacgcgggattcccgta
gatattcacccaactgaaaatctccctgctgccacacttgtgcttacaacacttcacgct
ggagggaagtttgaccaagatacttataaagtctctggagggttacacggggtaggtgta
tctgtggtaaatgccttatctaaaaagcttattatgacgattaagaaaaatgggcatatc
taccgccaagagtttgcacaagggattccacaaagtgagctagagattatcggtgagaca
aaagagcacggcacgattatagaattttaccccgatgatgaggtaatggaagtgctagag
tttgattcacaaatccttactcgtagatttaaagaaatggcttatctcaatcacaacatt
acaatttattttaaagatgaacgcacaggacaagaagaatcttatcattttgatgggggc
ttaaagcaatttatccaagatgtgaatacaaagcccttagtctctttaatcattagcttt
gaagccctagagcaggaaactgaagtagaaattgccctagcttataatgagggctatgat
gagaaagtattaagctttgtgaataatattagaacacctgatggtgggacacacgaagcg
ggatttagagcggggctaagccgtgcgattatgaattatattgaagccaacgccaacgca
cgagagaaagattctaaagttacaggtgatgatgtccgtgaggggcttgtagccattatc
tctacaaaagtcattgatccgcagtttgaggggcagacaaaaggaaagctaggtagtgcg
tttgtaaaacctattgtccaaaagctcacttatgaaaaactcgctaaattctttgaagaa
aacccaacggaagctagaatcattatgcaaaaagccattatggcagctcgtgggcgagaa
gcggcaaaaaaagcacgagatcttacacgcaagaaagaaagcttttcagtggggacattg
ccgggcaaattagcagattgtcaaagtaaagatcctagtgaatctgagatttatttagtt
gagggcgatagtgcgggtggtagtgcgaaacaagggcgagatagagcgtttcaagcgatt
ttgccattgcgtgggaagattctcaatgtggaaaaatctcgccttgataagattctaaaa
agtgatgaaattaaaaatatgattactgcttttggctgtggtataggagatgagtttaat
atagaaaagctccgctatcataaaatcattattatgactgatgctgatgtagatggtagc
catatccaaacgcttttaatgacatttttctatcgctatttgaaacctttagtagaaaat
ggacatatctatatcgcccagccaccactttatcgctacaaaaagggcaagacagaaatt
tatctcaaagatgaaagggcgttgagtgaatatcttgtagaaaatggtattgggaatttt
agctttgagggcattgggaataaagagcttttagaagtgctgaaattcatcgcccattat
cgctctatcctaaaagagcttgagaaacgctaccctatgattgatgtggtgcgttatctt
gtggaaaatgatagttttgataatctcactttaaatgaacttagtcaaaatatagaatct
tatctccaagccaaagaatgcaatattttaaataaaattacaagtgaagagcaaatcacg
ctgtatgtgcaaacaaaagtagggcttgtggagctgggcattaatgatagcttgtttatg
gataatttcttccaagaagcacgatttatttatcaaaaaatcgccgatagggatttagac
tttttaaaaggcaaaaatcttattgcgtttttagaaaagattgaagaaagtgcgaaaaaa
gatgcctatatccaacgctacaaaggcttaggagagatgaatccagatcagctgtgggag
actacaatgacaccggcaaaccgcacacttttgcgtgtgaagattgataatgatgcggat
actgatgagattttcacactttttatgggcgatgaggtagagccaagacgagcctatatc
caagaacatgccaaagatgtaaaacacttagatgtgtga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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