KEGG   Hippocampus comes (tiger tail seahorse): 109511075
Entry
109511075         CDS       T04969                                 
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
  KO
K04492  lymphoid enhancer-binding factor 1
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq04310  Wnt signaling pathway
hcq04520  Adherens junction
hcq04916  Melanogenesis
hcq05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    109511075 (lef1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    109511075 (lef1)
 09150 Organismal Systems
  09152 Endocrine system
   04916 Melanogenesis
    109511075 (lef1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    109511075 (lef1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hcq03000]
    109511075 (lef1)
Transcription factors [BR:hcq03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG TCF-1
    109511075 (lef1)
SSDB
Motif
Pfam: CTNNB1_binding HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 109511075
NCBI-ProteinID: XP_019717380
Position
Unknown
AA seq 408 aa
MDSSMYLDYQYSLRLKFNEYEEERRPLYLQQYQRRWGQDCGCEKRRDDMPQLSGGGGGDP
ELCATDEMIPFKDEGEPHKEQIFAELSHSEEEGDLADIKSSLVNESEGSPNSNSHDAARQ
SQDSYHEKHREHPDDVKHQDLYSKGHGYSSYPSYIMMGNMNDSYMTNGSLSPPMPRTSNR
VPVVQPSHAVHPLTPLITYSDEHFAPGSHSGHHPQDTKPQGMSRHHAGPEIANFYSLSPG
GVGQLTPPLGWFSHHMVPGPPGPHATGIPHPAIVNPQVKHEPLHETDIMHMKPQHEQRKE
QEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYEL
ARKERQLHMQLYPGWSARDNYGKKKKRKREKIQESAAGTGQRMKTAYI
NT seq 1227 nt   +upstreamnt  +downstreamnt
atggactccagcatgtatttggattaccagtattctcttcgtctgaaattcaacgaatat
gaggaggaaagaaggccactttacctccaacaatatcaaagaaggtggggacaggattgt
gggtgcgaaaagaggcgagacgacatgcctcagttgtcaggcggcggcggcggggacccg
gagctgtgcgccacggacgaaatgatcccgttcaaggacgagggggagcctcacaaggag
cagatcttcgccgagctcagccactcggaggaggagggagacctggccgacatcaagtcc
tcgctggtcaacgagtctgagggaagccccaacagtaacagccacgatgcggcaagacag
tcccaagactcatatcacgaaaagcacagagagcatcctgacgatgtgaaacatcaggac
ctgtacagcaaaggccacggatactcaagctaccccagctacatcatgatgggcaacatg
aacgactcctacatgaccaatggctccctctcgcctcccatgcccagaacgtccaacaga
gttcccgtggtgcagccgtcccatgccgtccacccgctcaccccgctgatcacgtacagc
gacgagcacttcgccccaggttcccattccggtcatcaccctcaggataccaaaccacaa
ggaatgtccaggcatcatgcgggaccagaaatcgccaacttctactcgctgtctcccgga
ggagtgggacagctcacgccgccgctgggatggttctcccaccacatggtcccgggaccg
ccgggccctcacgccacagggatcccccacccggccatcgtcaacccccaggtcaaacac
gagcccctgcacgaaaccgacatcatgcacatgaagccgcagcacgagcagcgaaaggag
caggagcccaaaagaccgcacatcaagaagccgctcaacgccttcatgctctacatgaaa
gagatgcgcgccaacgtggtggccgagtgcacgctgaaggagagcgccgccatcaatcag
atcctgggacggcggtggcatgcgttatctcgggaagagcaggctaagtattacgagtta
gcccgcaaggaacggcagctccacatgcagctctacccaggctggtctgcccgagacaac
tatgggaagaagaagaagcggaagcgggagaagatccaggaatcagctgcgggtacgggc
cagagaatgaaaacggcgtacatctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

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