KEGG   Hippocampus comes (tiger tail seahorse): 109513977
Entry
109513977         CDS       T04969                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
  KO
K03129  transcription initiation factor TFIID subunit 4
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    109513977
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hcq03021]
    109513977
   03036 Chromosome and associated proteins [BR:hcq03036]
    109513977
Transcription machinery [BR:hcq03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     109513977
   Coactivators
    SAGA/TFTC/STAGA complex
     109513977
Chromosome and associated proteins [BR:hcq03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TFTC complex
     109513977
SSDB
Motif
Pfam: TAF4 TAFH TAF
Other DBs
NCBI-GeneID: 109513977
NCBI-ProteinID: XP_019722309
Position
Unknown
AA seq 1112 aa
MAGASDPLEDMLSSEVDEKAVSDLVGSLESQLAGQSNSGGKTDESRGAGSVAPANHHLGK
TLPAPVGCTTLDQQQQGRRNKTDLHQDLNSTEKTVTPPFQSSTLSSGETAAAAASNSGSQ
SHGASITTLPASGVSTSPPASSISTAATPGGPTKASPDSDEPHADASKRRLASPRRSASA
RIKSLNGAAVTTRGNSSGSSPAAGGDDACDSPADCRPASTAAINTSTFTLANASLPAGQS
AIALDRGTPTIALHRLPSHIVAGIAQNGTSVSAMAQQGAQTPPVTSPPSASSYSSSSSSP
PAQANHSKIAPDPAEAPSECQSKSVTTSSVINTVSSVAVTTTPTSSSTTVAQPLTTTATT
TTTTTTTTIPAASVTTSCIGVQITSVTTTISTVRPTTAAPAIPAAPAIPTAPAIPAAASP
TMQTPTRPGLAAPQRIVAPQLIVRPPQQQTTIQLPPGFTIPSGMVLVRTELGQLVLVPQQ
ALAQAQAQAQAQAQGQAQAQNNISPRPATPTTGTSFRVSTPQSPATSQTTRQCALTPAKV
APSPSPAPSSPALQTTSSSSSSSSSSTSSFVTSCPALRPKGPVAPAVAVTAPQQTPVVST
PQALPAQAASQPPQTTGIAVTPGAPVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSK
NVKALVQDLLDAKIEPEEFTSRLQTELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTQP
PQQGIKPAVPIVSGPAVHVRPPNSVGATGTSVLPHGTMGHAAAAGMKTTGPVGGQVRMPV
MITQSMRAQGTMGKVGTFQAGRSTVGLAVQISGNQKNKLNDPGGGSFRDDDDINDVASMA
GVNLNEESARILATNSELVGTQIRSCKDEAFLHPGLLHRRILETAKKFGVMEVPMEVVTF
ISHAAQSRLRTVVEKVSAIAQHRLDSCKDDECYEQSADVRSQLRFFEQLERMEKARKDEQ
EREILLKAAKSRSRQEDPEQARLKQKAKEREKATRLLACELHFCLCGVPSAPWEARATGE
LGPPKRRFWQGAGDAFQLRKGGCVHLANPPHGILTPHQLLSHLCFVVESQGVVTAGVHTG
EGRTRARQHRACVFPLDCHVGLIRERQHDSPC
NT seq 3339 nt   +upstreamnt  +downstreamnt
atggcgggcgcctccgaccctctggaagatatgctctcttccgaggtggacgagaaggcg
gtgagtgacttggtgggctccctggagtctcagctggccggtcagagcaactcggggggc
aaaaccgacgagagccgaggcgctggctcagttgcccccgctaaccatcacttggggaaa
acgctaccagctccggtgggctgcacaacactagatcaacaacaacaagggcgccgtaat
aaaaccgacctgcaccaggatttaaactccacggaaaaaactgtcacacctcctttccag
agcagcaccctttcctccggtgagactgctgcagccgccgccagtaacagcgggtcgcaa
tcacatggcgcatccatcacaacactgcccgcgtccggcgtgtcaacttccccgccggcc
agcagcatcagcaccgccgctacccccggtggccccacgaaggcttccccggactcagat
gagcctcacgcggacgcttcaaaacgacgcctcgccagcccgcgacggagcgcctctgct
cggatcaagagtttgaacggtgccgccgtaaccacccgaggaaacagcagtggcagcagt
cccgcggcggggggcgacgacgcttgcgatagccccgcggactgccgaccggcgagcaca
gcagccatcaatacgtcgacgttcacccttgccaatgccagcctacctgcgggtcagtcg
gccatcgccttggaccggggcacccccacaatcgccttgcacagactacccagtcacatc
gtggccggcattgcccagaacgggaccagcgtgtcagcaatggcccagcaaggtgcccag
acgccccctgtcacctcgcccccatctgcctcctcttactcctcatcatcgtcctcgcca
cctgcacaggcgaaccacagtaaaatcgccccggaccccgcagaggctcccagcgaatgt
cagtccaaaagtgtcaccacgagctctgtcataaacactgtttcctccgttgccgtgaca
acaacacccacctccagctcgaccacagtagctcaacctttaaccacaactgctacgaca
accacgaccaccaccaccaccaccataccagctgcctcagtgacaacaagctgcattggc
gttcagattacatcagtgaccaccactatcagcacggtccgacccaccaccgccgccccc
gcgatccctgccgcccccgccatccccactgcccccgccatccccgctgcagcctcacca
accatgcagacccctacccggcccggtttggctgcacctcagaggatcgttgcaccccag
ctcattgtcagaccaccccagcagcagaccactattcagctgccacctgggttcaccatt
ccgtctggcatggtgctggtacggaccgagctgggccagctggtgttggttcctcagcag
gctttggctcaagctcaggcgcaggcacaagcgcaggcacagggtcaggcacaggcccag
aataacatctctccgcgacctgccactcccactaccgggacgtccttcagagtaagcact
ccacagtctccagcaacctctcagaccaccaggcagtgtgccctgaccccggccaaggtg
gcaccgtctccctctcctgctccttccagccctgccctccagaccacctcctcctcctcc
tcctcctcttcttcctctacttcttccttcgttacctcctgtcccgcactacgcccaaag
ggccccgtggcgccggccgtggcggtgacggctccgcagcagacccctgtggtttccaca
ccccaggccctgccggcccaggctgcctcacaacccccgcagacgacgggcatcgccgtg
acccctggagctcctgtcgtgtcccaggaaatgcaggaaaacgtgaaaaagtgtaaaaac
ttcctagccacgctcatcaagctggcatcacacaactccccgtcgcctgaaacctccaag
aacgtcaaagctcttgtgcaagacctgctggatgccaaaattgagccggaggagttcacg
agccggctgcagacggagctcaagtcgtcaccacagccttacctggtacccttccttaag
aagagcctcccggccctgcggctgtctttgcttaacagtcagcagtccttgacccagcca
ccgcagcagggcatcaaaccagcagtgcccattgtgagcgggccggccgtccacgtacgt
cccccgaacagcgtcggggccacgggtaccagcgtgctgccccatgggacgatgggccat
gcagccgccgcgggtatgaagaccacaggccccgtgggcggacaagtccgaatgcctgtg
atgatcacacagtccatgagagctcaaggcacaatggggaaggtgggcaccttccaagca
gggaggagtacggtgggcttggctgtccagatctccggcaaccaaaaaaacaagctcaac
gaccccggaggaggctctttcagggatgacgacgacatcaacgacgtggcctccatggcg
ggcgttaatctgaacgaggagagcgcccgcatcctcgccaccaactcggagctggtcggc
acgcagattcgctcgtgcaaggatgaagccttcctgcaccctgggctcctccaccgacgc
atcctggaaacagccaagaagtttggtgtcatggaggtgcccatggaggtcgtgacgttt
atatcgcacgccgcacagtcgcgacttcgcacagtcgttgaaaaggtttcggccatcgcg
cagcacagactggactcctgcaaggacgacgaatgctatgagcagtcggccgacgtgcgc
tctcagctgcgcttcttcgaacagctagagaggatggaaaaggcgaggaaggacgagcag
gagagagagatcctcttgaaagccgccaagagtcgctccaggcaagaggacccagagcaa
gctcgactgaaacagaaagccaaggagagggagaaagcgacacgtctcctcgcctgtgag
cttcacttttgtctttgcggcgttccaagcgctccttgggaagcgcgagcgacgggggaa
ttgggcccacccaagcgacgcttttggcaaggtgccggggatgcgtttcaattaagaaaa
gggggctgcgttcaccttgcaaatcccccccacggaattctgaccccacaccaactcttg
tcccatctttgctttgtggttgaatcccaaggtgtcgtcactgcgggcgtccatacgggg
gaaggaaggacaagagcgcgccagcatcgggcctgcgtgtttccattagattgtcatgtt
gggctaattagagagcggcaacatgattcaccttgttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (53)   
   KEGG ORTHOLOGY (1)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (3)   
   Pfam (3)   
All databases (69)   

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