KEGG   Hippocampus comes (tiger tail seahorse): 109518475
Entry
109518475         CDS       T04969                                 
Symbol
dhx36
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX36
  KO
K14442  ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109518475 (dhx36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hcq03019]
    109518475 (dhx36)
Enzymes [BR:hcq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     109518475 (dhx36)
Messenger RNA biogenesis [BR:hcq03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Other 3'-5' decay factors
     109518475 (dhx36)
SSDB
Motif
Pfam: HA2_C Helicase_C DEAD OB_NTP_bind HA2_N AAA_22 nSTAND3 NB-ARC ATPase AAA_19 T2SSE
Other DBs
NCBI-GeneID: 109518475
NCBI-ProteinID: XP_019729874
Position
Unknown
AA seq 1056 aa
MSSKYGGGGRGRRGGSSRGSSRGHRDGSRERAGRGGGNSGSFDLDNASGRHPSHLKGREI
GLWYAKFGAVRKKQADRRSRAVVQMDEAREQHIIKLLDSVQNDQSALERPNRDARGSALD
GWRAPPSKSSHCYFDGDMTEEEKERIKFEEEGSISQAVVKDEIPDTWDDDDDDDADDDVI
DHRDDDDDDDDDVEQQQMKGGEDREKDKDLEFLLQEIARDVSLDESLKRDLQSKKTHPKY
KEMLMFREKLPSYGKKEELVRLINSNQVLVVSGETGCGKTTQVTQFILDDHIKRGMGSMC
RVVCTQPRRISAISVAERVAAERAEKVGSGNSCGYQIRLQSQLPRRQGSVLYCTTGIILQ
WLRSDPQLSSISHLVLDEIHERSLHSDVLLTIVKDLLDVRHDLKVVLMSATLNAEKFSKY
FDSCPMIHIPGLTFPVEEFLLEDVVEMTRYRPKNQDRRPAWKRGFWQGRHSRPEKEEKEA
EYKESWPCYARTLQAKYSESTIAALEMLDGDDKIDLDLILALIRHIVLNDEEGAILVFLP
GWDNISSLNDLLMAQQMFRSDRFIIIPLHSLMPTVNQTLVFKRPPPGVRKIVIATNIAET
SITIDDVVFVIDGGKIKETNFDTNNNISTMTAEWVSLANAKQRKGRAGRVCPGKCYHLYN
GLRASLLDAYQLPEIMRTPLEELCLQIKILKLGGIAHFLQKALDPPTEKAVNLAIKNLKD
LNALDHSENLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLG
KEQMADKRRKVLSRNSKSDHLTVVNAFQGWQEAKQHGGRYEREFCWDNFLSANTLQMLHN
MKGQFAEHLMHTGFVSSKDPKDPNSNVNSGGXDRRSCHSKKRPGVKVYTKHDGKVCIHPK
SVNYEETNFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITIQKDDDQETIAVDQ
WIVFRSPARTAHLVKNLKRELDSLLEDKIRKPAPVDWQNHHSKDCAVITAIIDLITTQEM
TATAAGPEGGARGHDRTWAPRGQHIYFNDDGDDDDN
NT seq 3171 nt   +upstreamnt  +downstreamnt
atgagttctaaatacggaggcggtggccgaggcagaagaggtggtagtagtagggggagc
agtagaggccaccgtgatggcagcagagaaagagccggccggggaggtgggaatagtggc
agcttcgacctggacaacgccagtggtcgccatccttcacatttgaagggccgagagatt
ggcttgtggtatgcaaaattcggagccgtgagaaagaaacaggcagaccggcgatcgagg
gcagtggtccagatggatgaggccagagagcagcacattatcaagctgctcgactctgtc
cagaatgaccagtcagctctggaaagaccaaacagagatgcgagaggctctgcattggac
ggctggcgtgcacctcccagtaaaagtagtcactgctactttgacggagacatgactgaa
gaggaaaaagagagaatcaaatttgaggaggagggttcaatctctcaagcagttgttaaa
gatgagatccctgacacttgggatgatgatgatgacgatgatgctgatgatgacgtcatt
gaccatcgtgatgatgatgatgatgatgatgatgatgtggagcagcagcaaatgaagggg
ggtgaagacagggagaaagacaaagatctcgagttcttactccaggaaatagccagagac
gtttcgctggatgagtcattgaagagggatctgcaaagtaaaaaaacacaccccaagtac
aaggaaatgctgatgttcagagagaagctgccatcgtacggaaagaaagaggagctggtc
cggctgatcaactccaaccaagtgctggtggtgagcggcgaaacgggctgcggaaaaacc
acccaggtgactcagttcatcctggatgaccacatcaagcgcggcatgggctcgatgtgc
cgcgtggtttgcacgcagcctcgacgcatcagcgccatctcggtagcagagcgcgtggct
gctgagagggcagagaaggttggcagtgggaattcgtgtggttaccaaattcgcttgcag
agccagttaccacggagacaaggttcggtcctgtactgtaccacgggcattattcttcag
tggcttcgctctgacccgcagttatcaagtattagccacttggttcttgatgagatccac
gagagaagcctgcactcagacgtgttgctcaccatcgtcaaggacctactcgacgtgcga
cacgacctcaaggttgttctgatgagtgccacgctcaatgcagagaaattctccaagtac
tttgacagttgccccatgattcacatcccgggcttgacattcccagtggaggagttcctg
ctcgaggacgttgtggagatgaccaggtatcgtcccaagaaccaggaccgccgacccgcc
tggaaaagaggcttctggcaggggcgccactccagacccgagaaggaggagaaggaggct
gaatacaaggagagctggccttgttatgctcgcacactgcaggccaaatactctgagagc
accatcgccgctcttgagatgctggatggcgatgacaagattgacttggacctcatcttg
gcacttatccgccatattgtgctcaacgatgaggaaggagccatcttggtcttcctgcca
ggctgggacaacatcagcagcctcaatgacttgctgatggcacaacagatgttcagatca
gatcgttttatcatcattccgctgcactcactcatgccaacggtgaatcagacgctggtg
tttaaacgtccaccacctggtgtgcggaagattgtgattgctaccaatatagcggagacg
agcatcaccattgatgatgtggtttttgtgatcgacggaggcaagatcaaggaaaccaac
tttgacaccaacaacaacatcagcaccatgacggccgagtgggtgagcctggccaacgcc
aagcagaggaaagggcgtgctggcagagtgtgcccggggaagtgctatcatctgtacaac
ggtctccgagccagccttctggatgcctaccaattaccagaaattatgaggactccgctg
gaggagctgtgcctgcagatcaagatattaaagctcggaggcatcgctcacttcctgcag
aaagctttggaccctcccactgaaaaggcagtgaatctggccataaagaacctcaaagac
ctgaacgctttggaccattcggagaacctgacggcgctgggtttccacctggctcgcctc
cccgtggaacctcacatcggaaagctcatcctgttcggagcgctgcttggctgcctcgac
cccgtacttaccatcgccgcctccctcagcttcaaagaccctttcttcatccccctgggc
aaagagcagatggcagacaagaggcgcaaagtgttgtccaggaactccaaaagtgatcac
ctcactgtggtcaatgctttccagggctggcaggaagcgaaacagcatggcggccgatac
gagcgggagttctgctgggacaacttcctgtctgctaacacactccagatgttacacaac
atgaagggtcagtttgccgaacacctcatgcacacaggcttcgtcagcagcaaggaccca
aaagaccccaactctaatgtcaactcaggtggantagataggaggagctgtcacagcaaa
aagaggcccggggtgaaagtgtacacgaagcacgacgggaaggtgtgcatccaccccaaa
tccgtcaactatgaggagaccaacttcaactacacatggctcatctatcacctcaaaatg
agaaccagcagcatcttcctgtacgactgcaccgaagtgtcacccttctcgctgctgttc
ttcggaggcgacatcaccatccagaaggacgacgaccaggagaccattgccgtggaccag
tggatcgtcttcaggtcgccggcacgcacagctcacctcgtcaagaatctaaagcgagag
ctggattctctgctggaggacaagatccgcaagccggcacctgtggactggcagaaccac
cattccaaagactgcgccgtcatcaccgccatcattgacctcatcaccacgcaggagatg
accgcaacagcggcggggcctgagggtggcgccagaggccacgaccgaacgtgggccccc
agaggacaacacatttacttcaatgacgatggcgatgatgacgacaattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (43)   

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