KEGG   Hippocampus comes (tiger tail seahorse): 109518721
Entry
109518721         CDS       T04969                                 
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A
  KO
K10696  E3 ubiquitin-protein ligase BRE1 [EC:2.3.2.27]
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hcq04121]
    109518721 (rnf20)
Enzymes [BR:hcq01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109518721 (rnf20)
Ubiquitin system [BR:hcq04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   BRE1 proteins
    109518721 (rnf20)
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-RING_UBOX zf-RING_5 BRE1 zf-RING_2 zf-rbx1 zf-ANAPC11
Other DBs
NCBI-GeneID: 109518721
NCBI-ProteinID: XP_019730302
Position
Unknown
AA seq 1071 aa
MAHLQLTIDNSLQLPLPRVKKPQYQHLRVRFHISFQIPHIKKRCLGMSGQKRPADPSGPT
STSGVHLEKRRERDGEDGGPGISAAAAGGSTAVETVIKLGGVSNSEEQDIKALQAKNRKL
GESLDQRQGIEDELRERIERLETRQATDDASLLILNRYWNQLDENIKMFVRLYDQSPSEP
EKSPTGEGRNLKPETPEPDGDSNQERAKDRGHQGETSNSFLATLASSTSEEMEAELQERV
QSSQMQVTHVVEIYNCLKSTVDQLKADMDSGVAGSMCHVASKLNTLLTSENERLQQLSED
LKQKHSHMTSESRALGRAANKADQRVSELQVLSEELQWDMEKIRRRENRLNAHMSEILER
VNSKGYKVCGEASSVCGTITINKRKFEEMNSELEENQELADNRLIELQKLQQDLQNVFQE
NNNMKAELLSRAEGMVKDTSEYRCLQSQFSVLYNESLILKAQLDETRARLNTTRTARLRQ
LEHMENDEVTLQRKVRTEVFQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHL
ISTLQTHNQQMKGEVVKYKLRLRETQAELNQIRISKGSTILQTQSSTEMDMKEETTSPTT
AAVSGEPAVKLEPPENDSFTPNSTGISVKTEPGVEPEITTKEEEKEEKKEKEDKKDKEII
KKEEKDREREKERERPTRSGTKSSGIKEEKEKLSIGNQLDESSGERLSAAGGPKRKEMEQ
LKIVRVELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKAKSESEELRQRLRELE
ERERREGKKMADEEALRKIRSVEEQIDILNKKLSIAKQEEDALLSEMDVTGQAFEDMQEQ
NIRLMQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELSDQLLTLKTQVDAQLQVVRKL
EEKERLLQGTISTAERELTLRTQALDMNKRKAQESTLLSEEVRLQLEQVQQRLGVVREEV
VENSISREKESFNSRRAQEDISKLRRKIEKAKKPAEKISNGDEILNEEISEYKARLTCPC
CNSRVKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq 3216 nt   +upstreamnt  +downstreamnt
atggcgcacttgcaattgactattgataattcgctgcagcttccgcttccgagagtaaag
aagccgcagtatcaacatttgcgagttagatttcacatttcatttcagattccccacatt
aaaaagaggtgtctcgggatgtcggggcagaagcgtcctgcagaccccagtggccctacc
tcaacctctggtgtgcacctagagaagcggagagagcgggatggagaggacggaggtccc
ggtataagtgcggcagctgcaggtggaagcacagcagtggagacggtcatcaaactggga
ggggtttctaactcggaagaacaagatataaaagctctccaggcgaagaaccggaaactg
ggtgaatctttagatcaaagacaggggattgaagatgaattgcgagagcgaatcgagaga
ttagagacccgccaggccacggatgacgcaagcctgcttatcctcaatagatactggaac
cagcttgatgaaaatattaagatgttcgtcagattgtatgaccaatcgccaagtgaacca
gagaagtctccaacgggagagggtaggaacctgaagccggaaacccctgaacccgatgga
gactccaatcaggagagggccaaggacagaggccaccagggtgaaacatccaactctttc
ctggctaccctggccagcagcaccagtgaggagatggaagccgagctccaggagagggtg
cagtccagtcaaatgcaggtcactcatgttgtggagatctacaattgtctaaagagcaca
gtagaccaactgaaggcagacatggattctggagttgctgggagcatgtgccatgtcgct
tccaaattaaacacgctgctgaccagtgaaaatgagcgtcttcaacaactctctgaggac
ctcaagcagaaacacagtcacatgaccagtgagtcccgagctcttggccgtgcagcaaac
aaggcagaccagcgtgtcagcgagctgcaagttctgagtgaagagcttcagtgggatatg
gagaagatccgtcgacgagaaaatcgcctcaatgcacacatgagtgagatactggagagg
gtgaacagcaaaggttacaaagtatgtggggaggccagtagcgtatgtggaaccatcact
atcaacaaaagaaagtttgaggaaatgaacagtgaactggaagaaaaccaagagctggca
gacaatcgtctcattgagcttcagaagctccagcaggaccttcagaatgtgtttcaggag
aacaacaacatgaaggctgagctgctgagtcgagcggagggcatggtgaaggatacctct
gagtatcgctgtctgcagtcacagttttctgtgctgtataatgagtctctgatcctcaag
gctcagttggacgagacacgggcccgtctcaacacaactaggacggcacgccttcggcag
ctggagcacatggagaacgatgaggtgactctgcagaggaaggttcgcactgaagtgttt
cagctggaagatacccttgctcaagttaggaaggagtacgagatgctgcgtattgaattc
gaacagactcttgccgccaacgagcaggcaggcccaataaacagagagatgcggcatctg
atcagcaccctacaaactcataaccagcagatgaagggagaagttgtgaaatacaagctg
agattgagagagacacaagctgaacttaaccagattcgcatttcaaagggaagtaccatt
ctgcaaacccagtcaagcacggaaatggacatgaaggaggagacgacatcccctacgaca
gcagctgtctcaggagagccagcggtcaagttagaacctcctgagaacgactcttttaca
ccaaacagcactggcatctctgtgaaaaccgagccaggagttgaacctgagataacaacc
aaggaggaggaaaaagaggagaagaaagagaaggaggacaagaaagacaaagaaatcatt
aagaaagaggagaaagaccgtgagagggaaaaggagagagagaggccaactcggagtggc
acgaagagtagtggaataaaggaagagaaggagaaactgtcaattggcaaccaacttgac
gagtcatctggggaacgtctttctgctgctggagggccaaagcggaaagagatggagcag
ctgaaaattgtcagagtagagctcaagaaagctcaggagtcccagagggaaatgaagctg
ctcttagacatgtatcgatcagcgccgaaagagcagagggacaaagtccagctgatggca
gcggagaagaaggccaagtcagagtcggaggagctgcgtcagagactcagggagctggag
gagcgggagaggagagagggcaaaaaaatggctgacgaggaggccctaagaaagattcgc
tctgtggaggaacagatcgacatcctgaacaaaaaattgtctatagcaaaacaggaggaa
gacgcattgctgagtgagatggacgtgacgggacaggcctttgaggacatgcaggaacag
aacattcgcttgatgcagcagctccgggaaaaggacgatgccaacttcaagctgatgagt
gaacggatcaagtccaaccagatccacaagttactgaaagaggagaaggaggagctgtcg
gatcagctgctcactttaaaaacacaggtggatgcccagctgcaggtggtgaggaagctt
gaggagaaagagcgcctcctgcagggcaccatcagcactgctgagagggagttgacgctg
aggacgcaagcactggacatgaacaaacgcaaggctcaagagtcaacgttgttgtcagag
gaagttcgacttcagctggagcaggttcagcagaggctcggcgtggtccgagaggaggtc
gtagaaaatagcatctcgagagagaaggagtcgtttaactcccggcgagcacaggaggac
atctcgaaactgaggagaaaaatcgagaaggcaaagaaaccagctgagaaaattagcaat
ggagatgaaatcctaaatgaagaaattagtgagtataaggctcgtctcacgtgtccctgt
tgcaactcccgggtaaaggatgccgtcctgacaaagtgcttccacgtcttctgcttcgag
tgcgtcaagacacgctacgacacacgccagaggaaatgccccaagtgcaacgctgcattt
ggagccaacgacttccatcgcatttacatcggctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (52)   

Download RDF
DBGET integrated database retrieval system