KEGG   Hippocampus comes (tiger tail seahorse): 109518748
Entry
109518748         CDS       T04969                                 
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq04010  MAPK signaling pathway
hcq04020  Calcium signaling pathway
hcq04510  Focal adhesion
hcq04540  Gap junction
hcq04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    109518748 (pdgfrb)
   04020 Calcium signaling pathway
    109518748 (pdgfrb)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109518748 (pdgfrb)
   04540 Gap junction
    109518748 (pdgfrb)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    109518748 (pdgfrb)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:hcq01001]
    109518748 (pdgfrb)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:hcq04090]
    109518748 (pdgfrb)
Enzymes [BR:hcq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     109518748 (pdgfrb)
Protein kinases [BR:hcq01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   109518748 (pdgfrb)
CD molecules [BR:hcq04090]
 Proteins
  109518748 (pdgfrb)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase Ig_3 I-set Ig_2 ig V-set Adeno_E3_CR1 C2-set_2 RIFIN VEGFR-1-like_Ig-like Herpes_gp2 Adeno_E3_CR2
Other DBs
NCBI-GeneID: 109518748
NCBI-ProteinID: XP_019730348
Position
Unknown
AA seq 1102 aa
MSCSTMRSQTIFTLRLAVTVLLFLRANVSCLEVTPHDGQLILPTGSSITLTCSSSGETAW
EFKRDDVPYFQVEQGQNGVQSYQIVQDGIKSSSLSLWNVSWKHTGVYQCIDRHNGERKEV
DVFVPDPQVWFVESAHGMLTKTSELTTIPCVVTNPKINVSLYEKDTDLPVKGLYVPSEGY
TAALEDRTYVCRGKMNGEVKESQAFNVLSIFVPEAIDAYINASQTVLKQGEPLTVNCTVH
GAQLVFFSWDVPNTVAADVEQLTDVLSAMNMRSYLIIPHATLAHSGNYVCHAHEQVQDQT
ADASVNITVLERGFVALYPAENQHIWARLQENVELKVEVEAYPSPQVSWSKDGTAIKGDK
IIMNRQEHEIRYVSILTLVRVRPEQRGLYTARVTNGDDTKEVTFDLEVQVPSQIKDLTDH
HLPGKRHLVTCIAEGVPTPTIHWYSCNSMLKCDNKTTIWQPLEPEAEALSIHTNITRSES
RKTSQVWSRLTFHKPQQVTVRCETSNQPGKVDRRDVKLVSSTLFSQVAVLAAVLALVVII
ILSIIILIAVWRKKPRYEIRWKVIESVSQDGHEYIYVDPIHLPYDLTWEMPRDNLVLGRT
LGSGAFGRVVEATAYGLAHSQSCTKVAVKMLKSTARKSETQALMSELKIMSHLGPHLNVV
NLLGACTKHGPLYLVTEYCRYGDLVDYLHRNKHTFLQYFAEKNQDEDYLISRASSPLSQG
KGYVSFASESDGGYMDMSKDEPSVYVPMQEQMDSIKYADIQPSPYESTYQQDLYQEQVGG
RLDLVISDSSTLTYDDLLGFSFQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFG
LARDIMHDSNYISKGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPD
LPMNEMFYSALKRGYRMAKPAQASDEVYDIMKKCWEEKFEKRPEFSALVHRMGSLLTESY
KKRYSQVSDNFLKSDHPAVARTKPRLASPFPEANSTLGTPFPVSLSDPPEAGSQRSNPTP
SQEVVPSYNDYIIPIPDPKPEDVFTDMESGSPASSVAPEVEMDSVSQDTTATLPEEDRME
GTSERDALLGLSGTPEVEDSFL
NT seq 3309 nt   +upstreamnt  +downstreamnt
atgagctgctccactatgaggagtcagaccatcttcaccctccgtttggcagtcacagtt
cttctgtttctccgcgccaacgtgagctgcctggaggtcacgccacatgacggccagctt
atcctacccacgggctcctcgatcacgctcacctgttcgagctcgggggagactgcctgg
gagttcaagagggatgacgttccttatttccaagtagaacagggccaaaatggtgttcag
agctaccaaattgtacaggatggcatcaaatccagctccttgagcctgtggaacgtaagc
tggaagcacactggggtgtatcaatgcattgaccgacacaatggagaaaggaaggaggtg
gatgtcttcgtcccagacccccaggtatggtttgttgagagcgctcacggcatgctgaca
aagaccagtgagctgaccaccattccatgtgtggtcaccaaccccaaaatcaacgtctcc
ctctatgagaaggacactgacctcccagtcaaggggctctatgtccctagtgaggggtac
actgcagccctagaagacagaacatatgtgtgtcgcggaaagatgaacggagaggtgaaa
gagtcccaggctttcaacgttctcagtatcttcgtcccagaggctatcgacgcctacatc
aacgcatcacagacggtgctgaagcagggcgagccgctaacagtcaactgcaccgtgcac
ggagcacagctggtctttttttcatgggacgtccccaacacggtggctgctgatgtggaa
cagctaacagatgtcctgtcagccatgaacatgaggtcctacctcatcatccctcatgcc
acgctggcccacagcggaaactatgtctgccatgctcatgagcaggttcaggaccaaacg
gccgacgccagtgtcaacatcacagtgctcgaacgaggcttcgtggccttatatccggct
gagaatcaacacatttgggcccggctgcaggagaacgttgagctgaaggtggaggtggag
gcctacccttcccctcaggtcagctggagcaaagatggcactgccatcaaaggagacaaa
atcatcatgaacagacaagagcacgagatcagatatgtcagtatcctcacgttggtacgg
gtgaggccggagcagagaggactctacacagctcgggtcaccaatggagatgacactaaa
gaagtgacttttgacctggaagttcaagttccctctcagattaaagatctgactgaccac
caccttcctgggaagagacaccttgtgacctgtatagctgagggcgtcccgaccccgacc
atacactggtacagttgcaacagcatgctaaagtgcgataacaagaccacaatatggcaa
ccgctggaaccagaagcagaggcgctgagcatccacaccaacatcacccgcagcgagagc
cgtaaaaccagtcaggtgtggagccgcctgaccttccacaagccgcagcaggtcacagtt
cgttgcgagaccagcaaccagccggggaaggtggacagaagagatgtcaaactggtgtcc
agcacgctcttctcccaggtggcagtcctggcagcagtcctcgccttagtggtcatcatc
atcctgtccatcatcatcctcatcgccgtgtggaggaagaaacctcgttacgagatccgc
tggaaggtgatcgagtctgtgagtcaggacggtcacgagtacatctacgtggaccccatc
cacttgccctatgacctcacctgggagatgcccagagacaacctggtgctgggtcgcact
ctcggatcgggagctttcggcagggtggtcgaagccactgcatatggtctcgctcattcc
caatcctgcacaaaagtggccgtgaaaatgcttaaatcaacagccagaaagagtgagact
caagccctgatgtcagagctgaagattatgagtcacctgggtcctcatctcaacgttgtc
aacttactgggagcctgcacgaaacatggtcccctgtacctggtgactgaatactgtcgc
tatggtgacttagtggactacttgcacagaaacaagcacaccttcttgcagtattttgcc
gagaagaaccaagatgaagactacctgatctcgagggcaagcagtccgctcagtcaaggc
aaaggctacgtgtcatttgcaagcgagagcgacggaggctacatggacatgagcaaagac
gagccctccgtctatgtccccatgcaggagcagatggactccatcaagtacgccgacatc
cagccgtctccgtatgagtccacctaccagcaggacctttaccaggaacaagttggcgga
agactggacctggtcatcagtgactcgtccacactcacctatgatgacctgctgggtttc
agcttccaagtggcaaagggcatggagttcctggcctccaagaattgtgttcatcgtgac
ctcgccgccaggaatgtgttgatctgtgagggcaaactggtgaagatctgtgactttgga
ctggccagagacatcatgcacgactccaactacatttcgaaaggcagcaccttcctgccc
ctcaagtggatggcaccagaaagcattttccacaatctgtacacaaccttgagcgatgtg
tggtcctacggaattcttctctgggagattttcacgctgggaggaaccccataccctgac
ctgcctatgaatgagatgttctacagcgccctgaagagaggctacaggatggccaaacct
gcacaggcctctgatgaagtctatgacatcatgaaaaagtgctgggaagagaagtttgag
aagagacccgagttctccgccctcgttcacaggatgggcagcttgctgactgaaagctat
aaaaagagatacagccaagtcagtgacaacttcctgaagagtgaccacccagctgtagcc
cgcacaaagccacgcctcgcctccccctttcctgaagccaactcgacgttgggcaccccc
ttccccgtctccctctccgaccccccggaagctggcagtcagcgctcaaacccgactccc
tcgcaggaggtcgtgccctcgtacaacgactacatcatacccatcccggaccccaagccg
gaggacgtgttcactgacatggagtcgggaagccccgcgagctccgtagcgccggaggtc
gagatggactcggtgtctcaggacacgaccgcgacgctcccagaggaggaccggatggaa
gggaccagcgagagagacgctctgctgggcttgtcggggacgcccgaggtagaggacagc
tttctgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (46)   

Download RDF
DBGET integrated database retrieval system