KEGG   Hippocampus comes (tiger tail seahorse): 109523089
Entry
109523089         CDS       T04969                                 
Symbol
srf
Name
(RefSeq) serum response factor isoform X1
  KO
K04378  serum response factor
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq04010  MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    109523089 (srf)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hcq03000]
    109523089 (srf)
Transcription factors [BR:hcq03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   MADS-box responders to external signals
    109523089 (srf)
SSDB
Motif
Pfam: SRF-TF
Other DBs
NCBI-GeneID: 109523089
NCBI-ProteinID: XP_019737532
UniProt: A0A3Q2YFZ3
Position
Unknown
AA seq 601 aa
MLPSQVGSAPQGNASASSRGTVGLGSASVGGGNRPVLIRTGQASVGLGESVSGAGRHGTR
EALGMLGANGPGGPRGVRSGNGTGVSPLQAAIQGGMVGLNAGIVLPHGPRFDPDRESVPL
CSGSDNDSDSGDDDDPVGSLGDNRRGVKRERTEMEAAVPGQEVGGAPGGYGLVPGGVAGA
KPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHV
YTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESE
SMGDTKDTLKPTFTVAGLPGGTSSAQATVPTTSTSMQVSSGPNFPITNYLAPVSASTSVS
ANGTVLKTTGTSTGVMQIPGGFTFMPAGTPLPPGTPTIPLSQLQQHSLTLQGQHGQTLTA
APQPQQGQQAVFRFPAAVSLTGAGVPQQLQAIQVHPNTQTISNSESSPEMSHTSTNSTAT
VSLPATIVTSTVPSSVAGHMMYPSPHTVMYASTPALADGGLAVLNAFSQGTSAMQVSHAQ
AHEAASVPQVFLTAPPGTVQIPVSAVQLHPMVIGPQSSGSSTNLTELQVVNLDAAQNSKS
D
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgttaccgagccaggttgggtcggcaccacagggaaacgcgtcagcttcatcgagaggt
accgtcgggctcggttcggcctctgtcggtggcgggaatcgtcccgtcttgatccgaaca
gggcaagcttcagtcgggcttggggagagcgtgagcggggctgggcgacacggaaccaga
gaggcgctcgggatgttgggggcaaacggtccggggggtccacgaggtgtgaggtctggg
aacgggaccggggttagcccacttcaggccgccatccaaggcggcatggtgggtctcaac
gcggggatcgtgttgcctcacggacccaggttcgacccggatagagagagtgtgcctctg
tgcagcggctcggacaacgactcggactctggggatgacgacgacccggtgggttcgctc
ggggacaataggagaggggtgaagcgggagagaaccgagatggaagccgctgtcccgggc
caggaggtcggaggcgctcccggagggtacggcctggttcccggaggcgtcgcgggggcc
aagccggggaagaagacacgtggtcgcgtcaagatcaagatggaatttattgacaacaag
ttgagacgctacaccacttttagcaagaggaagactggcattatgaagaaggcctacgag
ctctccacgctgaccggaacccaagttctactgctcgtggccagcgaaacgggtcacgtc
tacacgttcgccacccgtaaactccagcccatgatcaccagtgaaacgggcaaagcgctg
atccaaacgtgcctcaactcgccggactcgccgccacgttctgacccctccacagaccaa
cgcatgagtgcgacaggcttcgaggagacggacctcacctaccaggtgtctgagtcggag
agcatgggcgacactaaggatactttgaaacccacgttcacagtagccggcctaccaggc
ggtaccagcagcgcccaggccaccgtgcccaccacctccaccagcatgcaggtgagcagc
gggcccaactttcccatcaccaactacctggcgcccgtctccgccagcaccagcgtcagc
gccaacgggactgtcctcaagaccaccggcacctctacgggcgtgatgcaaatacctggt
ggcttcactttcatgcctgcaggcactcctctcccccccggcacccccaccattcctctg
agccagctgcagcagcactccctgactctccaggggcagcatggtcagactctgaccgcc
gcccctcagcctcagcagggccagcaggccgtcttccgcttccctgctgctgtctccctc
acaggggcgggtgtccctcagcagctccaggccattcaggttcaccccaacacccagacc
atctccaacagtgagagcagccccgagatgtcccacacctctacaaactccacggctacg
gtgagtctcccggcgaccatcgtcacctcaacggtgccgtcgtctgtggccggtcacatg
atgtaccccagcccccacacggtgatgtacgcatccacgcccgcgctggctgacgggggg
ctcgccgtgctcaacgccttctcccagggcacgtcggccatgcaggtttcccacgcgcaa
gcccacgaagcagcgtctgtcccgcaagtgttcctcacggcccctccaggaacagtgcag
atccccgtctcggcggtgcaacttcacccaatggtgattgggccccagtcgagcggcagc
agcactaacctgaccgagttgcaggtggtcaacttggacgcggcgcaaaactccaaaagt
gactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (1)   
   Pfam (1)   
All databases (30)   

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