KEGG   Hippocampus comes (tiger tail seahorse): 109530161Help
Entry
109530161         CDS       T04969                                 

Definition
(RefSeq) ATP-dependent RNA helicase DHX8-like
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109530161
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hcq03041]
    109530161
Enzymes [BR:hcq01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     109530161
Spliceosome [BR:hcq03041]
 Complex C
  Other components
   Step II factors
    109530161
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HA2 OB_NTP_bind Helicase_C S1 T2SSE AAA_22 ABC_tran AAA_16 PhoH
Motif
Other DBs
NCBI-GeneID: 109530161
NCBI-ProteinID: XP_019749287
Position
Unknown
AA seq 1171 aa AA seqDB search
MAALDDLKCLEYLSLVSKVCTELENHLGISEKDLAEFIISLADKHPTFGEFKAALTQNGA
DFTETLTTNLFRIIKTMQASMTQAHQQNPKSERDKLKEKYPALCKADDPVWRMTSCQDIK
NDEQVAAAAMKELEMLMPHCAPGTNTTLHSARKNAASKVSTQKSHGLKLTDCDDDASGKR
RRKRPSRWSDRPPSPSRDAAREEVIPQPKPVERPLSDVPVVGNIYCGKVSSVMQFGCFVQ
LEGLRKRWEGLVHVSELRKEGRIADVSTVVSRGQKVRVKVLSMTGTKASLSMKDVDQETG
EDLNPNRRRNFEMGAGAGDDALRNPDFPVEVCIVESEENPSEQKRMAKITDLEKWEIKQM
IAANVLPKEEYPEFDEETGILPNFDDEDDVDVEIDLVEEEPPFLRGQTRWSTSMSPVKIV
KNPDSSLSQAAMMQSALAKERRELKQAARADEMDRIPTGLHKNWIDPMPDYDGRQIAANM
RGIGALPADVPEWKRYAFGGNQVSYGRKTELSIMQQRESLPIFNLKQQLVQAVHDNQILI
VVGETGSGKTTQITQYLAEAGYTARGKIGCPQPRRVAVRRQEGLGGVRLSPGPGGESEAA
CRVHNAHRVAAEYFYFEEEIDTACEMLFERMRMLGPDVPQLIILPVYSALPSEMQTRIFD
PAPLGSRKLRETPLLSSLCWDCIVDIVRGTLMTCKANRSQFKYMQSNFFVVFILSDVNSN
LPSPGDILVFLTGQEEIDTACEMLFERMRMLGPDVPQLIILPVYSALPSEMQTRIFDPAP
LGSRKVIIATNIAETSLTIDGIYYVVDPGFVKQIVYNSKSGIDQLVVTPISQAQAKQRSG
RAGRTGPGKCYRLYTERAYRDEMLTSNVPEIQRTNLASTVLSLKAMGINDLLAFDFMDSP
PMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIV
SMLSVQNVFYRPKDKQIQADQRKAKFFQPEGDHLTLLAVFNSWKNNKFSGPWCFENFIQG
RSLKRAQDIRKQMMSIMDRHKLDVVSCGKSTMRVQKAICSGFFRNAARKHPQDGYRTLID
QQVVYLHPSSTLFNRQPEWLVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTRL
SKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq 3516 nt NT seq  +upstreamnt  +downstreamnt
atggcagcgctggatgacctgaaatgtttggagtatttatctttggtgtccaaagtgtgc
acggagttggaaaaccaccttggaataagcgaaaaggatcttgctgaattcatcatcagc
ctcgcagacaaacatccaacatttggggagtttaaagctgccttgacacaaaatggagcc
gactttacggaaacgctcaccacgaatttatttcggattatcaaaaccatgcaagcgtca
atgactcaagcacatcagcaaaaccccaagagcgaacgagacaagctgaaagagaaatat
cctgctttatgtaaagcagatgatcccgtgtggcggatgacgtcatgccaagacattaaa
aacgatgagcaagttgccgcagcagccatgaaggagctggagatgctcatgcctcactgt
gcacctggcacaaacacaacattgcacagtgccagaaaaaacgctgcaagcaaggtgagc
actcagaagtcgcatggtctcaagttgacagactgtgacgacgatgcgtcgggcaagcgg
cgacggaaacgaccgtcccgctggagtgaccgaccgccgagcccgtcccgagacgccgcc
cgggaggaggtgatcccgcagcccaaacccgtcgagcggcctctgtccgacgttcccgtg
gtgggcaacatctactgtgggaaagtgtccagcgtcatgcagtttggatgctttgtccag
ctggaaggtcttaggaagcgctgggaaggtctggtgcacgtgtcggaactgcgcaaggaa
gggcgaatagcagatgtgtcgactgtggttagcaggggacaaaaggtccgggtcaaagtc
ctgtccatgaccggaacaaaggccagcctcagcatgaaggacgtcgaccaagaaaccgga
gaggacctgaaccccaaccgtaggaggaactttgaaatgggcgcgggtgccggggacgat
gccctgaggaatccagactttcccgtggaggtctgcattgtggagagcgaggagaaccca
agtgagcaaaagcgaatggccaagatcaccgacttggaaaaatgggagatcaaacagatg
attgccgccaacgtgctcccgaaggaggaatacccggagtttgatgaggaaactggaatc
cttcccaactttgacgacgaggatgatgtggacgtggagatcgacttagtagaagaggaa
ccacccttcttgcggggtcagacccggtggagcaccagcatgagtcccgtcaagatcgtc
aagaatcccgacagctcgctgtcacaggcggccatgatgcagagcgccctggccaaagag
cgtcgcgagctcaagcaggcggctcgcgcagacgagatggaccgcatccccaccggcctc
cacaagaactggattgaccccatgccggactacgacgggcggcagattgccgccaacatg
cgcggcattggcgcactgccggccgacgttcccgagtggaagcggtacgccttcgggggc
aaccaggtgtcctacggcaggaagacggagctgtccatcatgcagcagcgggagagtctt
cccatcttcaacctcaagcagcagctggttcaggccgtccacgacaaccagatcctgatc
gtggtgggcgagaccggctccgggaagaccacgcagatcacgcagtacctggcggaggcc
ggatacacggcgcgcgggaagattggctgcccgcagccccgccgcgtggctgtccgtcgc
caagagggtctcggaggagtacggttgtcgcctgggccaggaggtgagagcgaagccgcc
tgtcgtgtgcacaatgcccaccgggtggcagcagagtacttttactttgaggaggagatc
gacacggcctgcgaaatgctcttcgagcgcatgcggatgctgggccccgacgttccgcag
ctcatcatccttcccgtctattcggcgctgcccagcgagatgcagaccaggatctttgat
ccggcgccactcggcagcaggaaactgagagaaactccacttctaagctctttgtgttgg
gattgtattgttgatattgtgagaggaaccttgatgacctgcaaggccaaccgttcccag
tttaagtacatgcaatccaatttttttgttgtttttattttgagcgatgtcaattccaat
ctcccctctccaggtgacatcctggtgtttttgaccgggcaggaggagatcgacacggcc
tgcgaaatgctcttcgagcgcatgcggatgctgggccccgacgttccgcagctcatcatc
cttcccgtctattcggcgctgcccagcgagatgcagaccaggatctttgatccggcgcca
ctcggcagcaggaaagtgatcatcgccaccaacatcgccgagacatcgctgaccatcgac
ggcatctactacgtggtggaccccggtttcgtcaaacaaattgtttacaactccaagtca
ggcattgaccagctggtggtgacgcccatctcacaggcgcaggccaagcagcgttcgggc
cgagcgggcaggacgggtcccggcaagtgttaccgcctctacacggagcgagcgtacagg
gacgagatgttgacttccaacgtgccggagatccagaggaccaacctggccagcaccgtg
ctctcgctcaaggccatgggcatcaacgacctgctggccttcgacttcatggactctccc
cccatggagacgctgatcacggccatggagcagctgtacactctgggcgcgctggacgac
gagggcctgctcacgcgactcggaaggaggatggccgaattccctctggagcccatgttg
tgcaagatgttgatcatgtccgtgcatctgggctgcagtgaggagatgctcaccatcgtc
tccatgttgtccgtgcagaacgtcttctacaggccaaaggacaagcagatccaggcggac
cagaggaaggccaaattcttccagcccgaaggcgaccatctcaccctgctggccgtcttc
aactcgtggaagaacaacaagttctccggcccctggtgcttcgagaacttcatccagggg
cgctcgctcaagagagcgcaggacatccgcaagcagatgatgagcatcatggacagacac
aagctggacgtggtgtcttgcggcaagtcgaccatgcgcgtccagaaggccatctgcagc
ggtttcttccgcaacgccgccaggaagcacccccaagacggctaccgtaccctcatcgac
cagcaggtggtgtacctccacccgtccagcacgctcttcaaccgccagccggaatggctc
gtctaccacgagctggtgctgaccaccaaggagtacatgcgcgaggtgaccaccatcgac
cctcgctggctggtggagtttgcgcccgctttcttcaaggtgtccgacccgacgcgcctc
agcaagcagaagaagcagcagcgcctggagcctctctacaaccgctacgaggagcccaac
gcctggaggatctccagagcctttaggcgacgctga

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