KEGG   Hippocampus comes (tiger tail seahorse): 109530179Help
Entry
109530179         CDS       T04969                                 

Gene name
dhx8
Definition
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109530179 (dhx8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hcq03041]
    109530179 (dhx8)
Enzymes [BR:hcq01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     109530179 (dhx8)
Spliceosome [BR:hcq03041]
 Complex C
  Other components
   Step II factors
    109530179 (dhx8)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: OB_NTP_bind HA2 Helicase_C S1 DEAD AAA_22 T2SSE AAA_19 Flavi_DEAD AAA_30 AAA_16 PhoH ABC_tran Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID: 109530179
NCBI-ProteinID: XP_019749316
Position
Unknown
AA seq 1200 aa AA seqDB search
MADVDELSQLEFLSLVSKVCTELDNHLGISDKDLAEFVISLAEKEPTFDGFKALLLKNGA
EFTDSLIGNLLRLIQTMRPPSKSSTSKGASEAQKPKSEKDRLKELFPALCRPNEAPPKLL
DEEDVKVASDAMKELEMFMPSVSGTDSKSDRSRTEKSRRRSRSRSRDRHRPRDRDRRRHH
HSRSRSRSRSRSRDRDRPRDRERSRRRERSSRWSERSPSPRRDHDRDWKDKHVDRPPPEE
PSVGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKI
KVLSFTGSKTSLSMKDVDQETGEDLNPNRRRNVGPDGSEEVNMRNPDGPSNLNLGPAREL
EQDDTLERKRLTKISDPEKWEIKQMIAANVLSKEEFPDFDDETGILPKVDDEEDEDLEIE
LVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAKERRELKQAAREAEMDS
IPMGLNKHWVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSILE
QRESLPIYKLKEQLIQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRR
VAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDSELGQYA
IIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGR
TYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSL
GPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFV
KQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTSNVPEI
QRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRM
AEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQPEG
DHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKAT
VRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKE
YMREVTTIDPRWLGEFAPAFFKVSDPTRLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq 3603 nt NT seq  +upstreamnt  +downstreamnt
atggcagacgtcgacgagctctcccagctcgagtttttatctttggtgtccaaagtgtgc
acggagctcgacaaccatcttggaatcagcgacaaagatttagctgaattcgtcattagc
ctcgcggaaaaagaacctacatttgacggctttaaagctctcctgctgaaaaatggagcc
gaattcacagactccctcatcggcaacttgctcaggcttattcagacaatgagaccaccg
tccaaatcgtccacaagtaaaggtgcctctgaagctcagaagccaaagtcagagaaggac
aggctgaaggagctattccctgcgctttgcagaccaaatgaagcaccgccgaaactcctg
gacgaagaagatgtgaaggtcgcttctgatgccatgaaggagctggagatgttcatgcct
agcgtgagcggcaccgattccaaaagcgatcggagccgcacggagaagagcagacgccgc
agtcggagcagaagccgggaccgacacagaccccgggacagggaccgcaggaggcatcac
cactcccgttcgcgctccaggtccagatctcgctccagagaccgcgatcgccccagagac
cgcgagcgctccaggcggcgtgagcggtcctcccgctggagcgagcgctcaccgagcccc
cgcagagatcacgaccgagactggaaggacaaacacgtggaccgcccgcccccggaggag
ccgtctgtgggtgacatctacaacggaaaagtcaccagcatcatgcagtttggatgcttt
gtccaactggagggcctcaggaaacgttgggaaggtttggtgcacatttcggagctgcga
cgagaaggccgagtggccaacgtggccgacgtggtcagcaaagggcaaagagtcaagatc
aaagtcttgtccttcacgggctccaaaaccagcctcagcatgaaagatgtggaccaggag
acgggtgaggacctgaacccaaacaggaggaggaacgtgggccccgacggcagcgaggag
gtgaacatgaggaaccccgacgggcccagcaacctcaacctcggccccgcccgcgagctg
gagcaggatgacacgcttgagaggaagagactcaccaagatatcggatccagaaaaatgg
gagatcaagcagatgatcgccgccaacgttttatccaaggaggaattccccgattttgat
gacgaaacggggatccttcccaaagtggacgacgaagaggatgaagacttggaaatcgag
ctggtggaagaggagccgccgttcctgagaggacacaccaaacagagcatggacatgagc
cccgtcaagattgtcaagaatcccgacggctcgctgtcccaggcggccatgatgcagagc
gctctggccaaagagcgcagggagctgaagcaagcggcgcgcgaggccgagatggactcc
atccccatgggcctcaacaaacactgggtggacccgctgcccgacgttgacggcaggcag
atagccgccaacatgcgcggcatcggcatgatgcccaacgacatccccgagtggaagaag
cacgcctttggcggcaacaaggcgtcgtacggaaagaagactcagctttccatcctggag
cagagggagagtttacccatctacaaactgaaggagcagctcattcaggccgtccacgac
aaccagatcctgatcgtgatcggcgagaccggctccgggaagaccacgcagatcacgcag
tacctggcggaggcgggctacaccacgcgggggaagatcggctgcacgcagcctcgccgc
gtggccgccatgtccgtcgctaagagggtctccgaggagtacggctgctgtcttggacag
gaggtgggctacaccatccgctttgaggactgcaccagccccgagacggtgatcaagtac
atgacggacggcatgctgctgagggagtgcctgattgactcggagctcggtcagtacgcc
atcatcatgctggacgaagcccacgagaggaccatccacaccgacgtcctctttgggttg
ctcaagaagacggtgcagaagcggacggacatgaagctgattgtgacgtcggccacgctg
gacgccgtcaagttctcgcagtacttctacgaggcgcccatcttcaccatccccggcagg
acgtacccggtggaggtgctctacaccaaagaacccgagaccgactacctggacgccagc
ctcatcaccgtcatgcagatccacctgaccgagccgcccggcgacatcctggtctttctg
accgggcaagaagagatcgacaccgcctgcgagatcctctacgagcgcatgaagtctctc
ggccccgacgtccccgaactcatcattctgccagtttattccgcgctgccgagtgaaatg
cagaccaggatctttgacccagcgccgccgggcagcagaaaagttgtcatagcaaccaac
atcgccgagacatcgctgaccatcgacggcatctactacgtggtggaccccggctttgtc
aagcagaaagtctacaactccaagacgggcatcgaccagctggtggtgacgcctatttcg
caggctcaagcgaagcagagggcgggccgcgccggccggacgggtcccggcaagtgttac
cgcctctacacggagcgagcgtacagggacgagatgttgacttccaacgtgccggagatc
cagaggaccaacctggccagcaccgtgctctcgctcaaggccatgggcatcaacgacctg
ctctctttcgacttcatggacgctccccccatggagacgctgatcacggccatggagcag
ctgtacactctgggcgcgctggacgacgagggcctgctcacgcgactcggaaggaggatg
gccgaattccctctggagcccatgttgtgcaagatgttgatcatgtccgtgcatctgggc
tgcagtgaggagatgctcaccatcgtctccatgttgtccgtgcagaacgtcttctacagg
ccaaaggacaagcaggccttggcggaccagaagaaggccaagttccatcagcccgagggc
gaccatctcaccctgctggccgtctacaactcgtggaagaacaacaagttctctaaccct
tggtgctacgagaacttcatccaggctcgctcactcaggagagcgcaggacatccgcaag
cagatgttgggcatcatggaccgacacaagttggatgtggtgtcctgcggcaaagccacc
gtgcgggtccagaaggccatctgcagcggtttctttcgcaacgccgccaagaaggaccct
caggagggctacaggaccctcattgaccagcaggtggtctacatccacccttccagtgct
ttgttcaaccgccagcctgaatgggttgtctaccacgagctggtgctgaccaccaaggag
tacatgcgcgaggtgaccaccatcgacccgcgctggctgggggagtttgcgcccgccttc
ttcaaggtgtccgacccgacgcgcctcagcaagcagaagaagcagcagcgcctggagcct
ctctacaaccgctacgaggagcccaacgcctggaggatctccagagccttcaggcgacgc
tga

DBGET integrated database retrieval system