KEGG   Hippocampus comes (tiger tail seahorse): 109531088
Entry
109531088         CDS       T04969                                 
Symbol
ubc
Name
(RefSeq) polyubiquitin-C isoform X1
  KO
K08770  ubiquitin C
Organism
hcq  Hippocampus comes (tiger tail seahorse)
Pathway
hcq03320  PPAR signaling pathway
hcq04120  Ubiquitin mediated proteolysis
hcq04137  Mitophagy - animal
hcq04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:hcq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109531088 (ubc)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    109531088 (ubc)
   04137 Mitophagy - animal
    109531088 (ubc)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    109531088 (ubc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hcq04121]
    109531088 (ubc)
Ubiquitin system [BR:hcq04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   109531088 (ubc)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 TBK1_ULD Rad60-SLD_2 Ubiquitin_5 OTU1_UBXL DUF2604
Other DBs
NCBI-GeneID: 109531088
NCBI-ProteinID: XP_019750714
UniProt: A0A3Q3DDY5
Position
Unknown
AA seq 989 aa
MQIFVKTLTGKTITLEVEGSDTVENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTVTLEVEGSDTVENMKAKIQYKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEDSDTVENVKV
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
VTLEVEGSDTVENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRSLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTVTLEVEGSDTVENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEDSDTVENVKVKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTVTLEVEGSDTVE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEGSDTVENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEGSDTVENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKPVTLEVETSDTVENVKAQIQDKEGI
PPDQQRLIFAGKPLEDDQTLSDYNIQKESTLHHVLRLRGGMQIFVKTLTGKTITLEVEGS
DTVENVKAKIKDKEGIPPHHQRLIFAGKQLGCDRTLSDYNIQKEATLHLVLRLRGGMQLF
VKTLTGKTITLEVEANDTVENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
ATLHLVLRLRGGMQIFVKTLTGKTITLEVEDSDTVENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGL
NT seq 2970 nt   +upstreamnt  +downstreamnt
atgcaaatctttgtgaagaccctaactggcaagaccatcacccttgaggttgaaggcagt
gacactgttgagaatgttaaagccaaaatccaggacaaggaaggtattcctcctgatcag
caaaggttgatctttgctggcaaacagttggaagatggccgcaccctctctgactacaac
atccagaaagagtccaccctccatcttgtcctgcgtctgagaggtggaatgcagatcttt
gtaaagaccctaactggcaagactgtcactcttgaggttgaggggagtgatactgttgag
aatatgaaggccaaaatccagtacaaggaaggcattccacctgaccaacagaggttgata
ttcgctggcaaacaattggaagatggccgcaccctctctgactacaacatccagaaggag
tccaccctccatcttgtcttgcgtctgcgaggtggcatgcagatctttgtgaagaccctc
actggcaaaaccatcacccttgaggttgaggacagtgacactgttgaaaatgtcaaggtg
aaaattcaggacaaagaaggcattcctcctgaccagcagaggttgatatttgctggcaaa
caactggaagatggccgcaccctctctgactacaacatccagaaagagtccaccctccat
cttgtcctgcgtctgcgaggtggcatgcagatctttgtaaagaccctaactggcaagacc
gtcactcttgaggttgaggggagtgacacagttgagaatgtgaaggccaaaatccaggac
aaagaaggcattcctcctgaccaacagaggttgatatttgctggcaaacaactggaagat
ggccgctccctctctgactacaacatccagaaggagtccaccctccatcttgtcttgcgt
ctgcgaggtggcatgcagatctttgtaaagaccctaactggcaagaccgtcactcttgag
gttgaggggagtgacacagttgagaatgtgaaggccaaaatccaggacaaagaaggcatt
cctcctgaccaacagaggttgatatttgctggcaaacaactggaagatggccgcaccctc
tccgactacaacattcagaaggagtccaccctccatcttgtcttgcgtctgcgaggtggc
atgcaaatatttgtgaagaccctcactggcaaaactatcaccctagaggttgaggacagt
gacactgtggaaaatgtgaaggtcaaaattcaggacaaagaaggcattcctcctgaccaa
cagaggttgatatttgctggcaaacaactcgaagatggccgcaccctctctgactacaac
atccagaaggagtccaccctccatcttgtcttgcgtctgcgaggtggcatgcaaatattt
gtgaagaccctaactggcaagactgtcactcttgaggttgaggggagtgatactgttgag
aacgtgaaggccaaaattcaggacaaagaaggcattcctcctgaccaacagaggttgata
tttgctggcaaacaactggaagatggacggaccctctctgactacaacatccagaaggag
tccaccctccatcttgtcctgcgtctgcgaggtggcatgcagatatttgtgaaaaccctt
actggcaagaccatcacccttgaagttgagggaagtgacactgttgagaatgtgaaggcc
aaaatccaggacaaggaaggcattcctcctgaccaacagaggttgatatttgctggcaaa
caactggaagatggccgcactctctctgactacaacatccagaaggaatccaccctccat
cttgtcctgcgtctgcgaggtggcatgcagatctttgtaaagaccctcactggcaagacc
atcacccttgaggtcgagggcagtgacactgttgagaatgtgaaggctaaaatccaggac
aaggaaggcattccccctgatcagcagaggttgatctttgctggtaagcaattagaagat
ggacgcaccttatctgactacaacatccaaaaagagtctacccttcatcttgtcctgcgt
ctgcgaggtggcatgcagatatttgtgaagacccttaccggcaagcccgtcacccttgag
gtcgagactagtgacactgttgagaatgtcaaggcccaaatccaagacaaggaaggcatt
cccccagaccagcagaggttgatatttgccggcaagccactggaagatgaccaaaccctc
tctgattacaacatccagaaggagtccaccctccaccatgtcctgcgtttgagaggtggc
atgcagatctttgtgaaaaccctaactggcaagacaatcactcttgaggtcgagggcagt
gatactgttgagaatgtcaaagccaaaatcaaagacaaggaaggtattccgcctcatcac
cagaggctgatctttgctggcaaacagctgggatgtgatcgcaccctctctgactacaac
atccaaaaggaagctactcttcatcttgtcctgcgtttgagaggtggcatgcagttgttt
gtgaagaccctcactggcaagaccatcacccttgaggttgaagccaatgatacagttgag
aatgtcaaggctaaaatccaggacaaggaaggtattccccctgaccaacaaaggctgatc
tttgctggaaagcagctagaagatggccgtaccctctctgattacaacatccaaaaggag
gctacgcttcatctcgtcctgcgtctacgaggtggcatgcagatttttgtgaagaccctt
actggtaagaccatcactcttgaggttgaggacagtgacacggttgagaatgtgaaagcc
aaaatccaggacaaggaaggaattccccctgatcaacagaggttgatatttgctggcaaa
caattagaagatggccgcacactctctgattacaacatccagaaagaatcaaccctccat
cttgtcctgcgtctgcgaggtgggctctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (1719)   
   KEGG ORTHOLOGY (1)   
   RefGene (1715)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (10)   
   UniProt (1)   
   RefSeq(pep) (9)   
DNA sequence (9)   
   RefSeq(nuc) (9)   
Protein domain (8)   
   Pfam (8)   
All databases (1753)   

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