KEGG   Halomonas campaniensis: FF32_05730
Entry
FF32_05730        CDS       T03198                                 
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
hcs  Halomonas campaniensis
Pathway
hcs03420  Nucleotide excision repair
hcs03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hcs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FF32_05730 (uvrD)
   03430 Mismatch repair
    FF32_05730 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hcs03400]
    FF32_05730 (uvrD)
Enzymes [BR:hcs01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FF32_05730 (uvrD)
DNA repair and recombination proteins [BR:hcs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FF32_05730 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     FF32_05730 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_30 AAA_12 Viral_helicase1
Other DBs
NCBI-ProteinID: AIA74362
Position
1297795..1299993
AA seq 732 aa
MDDVTAILDQLNPAQREAVSAPQGNLLVLAGAGSGKTRVLVHRIAWLMQAEGLSPYALLA
VTFTNKAAREMRTRLEALLSISMRHVWVGTFHSIAHRLLRTHWQDARLPQHFQIIDSDDQ
LRLVKRMLKDYSIDDERFPPRQVQGFISGCKEEGLRPHQVNVDGDGYLGQMVELYERYQF
ICERGGLVDFGELLLRSLELLRDNPPLLNHYRERFGHVLVDEFQDTNTLQYTWLKLLTGL
QTPMTAVGDDDQSIYGWRGAKVENIRRFEEEFPNTHTVRLEQNYRSTSAILEAANTLISH
NSERLGKNLWTDGVEGDPISVYAGFNDLEEARYIVDTIKEKVDEGFNRRDVAILYRSNAQ
SRLLEETLIRQGMPYRIYGGHRFYERLEIKNALAYLRLLLNRDDDASLERVINVPTRGIG
TRTVEIVRHRAREQSISLWQALHDAIQDGTLKGRAANAVQTFANLIEQLDNDASGLPLHE
IIDHITTHTGLIEHHKSERGEKGQARVENLEELVTAARAFTHGDAFETPEAGEGMAALEA
FLSEAALNAGDHEADEFEDSVQLMTLHSAKGLEFPVVFIAGVEEGLFPHKMSIEEPGRLE
EERRLCYVGVTRAMQKLYLTHAETRRLHGKEVFPRPSRFLRELPPHLLEEVRLRGHISRP
VTASRSSFAQQRVESDGDLPALHVGQRVMHPVFGEGIILNAEGEGARARVQVSFEGEGVK
WLVLGFAKLTPL
NT seq 2199 nt   +upstreamnt  +downstreamnt
atggacgacgtcacggcgatacttgatcagcttaaccctgcccagcgcgaggcagtaagc
gcaccccagggtaacttactggtactggcgggtgccgggtccggtaaaacccgcgtgctg
gttcatcgcattgcttggctaatgcaggccgaagggctttcgccgtatgccctgctggcg
gttacgtttaccaacaaggccgcgcgggaaatgcgcactcgtctggaagcgctgctgagc
atctccatgcgtcacgtgtgggtcggtacgttccactcaatcgcccatcgcctactgcgc
actcactggcaggatgctcggctaccacagcacttccaaatcatcgactccgatgaccag
ttacggctggtaaaacggatgctcaaagattattccatcgatgatgagcgcttcccgccc
cgccaggtgcaaggctttatctctggctgtaaagaggaaggacttcgcccccaccaagta
aacgtggacggcgatggttatcttggccagatggtagagctttatgagcgctaccaattt
atctgcgaacgcggcggcctggtggacttcggtgaactgctactgcgcagcctagaactg
ttgcgtgacaacccgcctttgctaaatcattaccgcgagcgctttggtcatgtattagtc
gatgagtttcaggacaccaatacgctgcaatacacgtggttaaaactactcactgggctg
caaacacccatgaccgccgtcggtgacgatgaccagtcaatttacggctggcgtggtgcc
aaagtggaaaatattcgccgctttgaggaggagtttcctaacactcacaccgtacgccta
gagcagaactaccgctccacaagcgcgattctggaggccgctaacacgctgatcagtcat
aacagcgagcggctgggtaaaaatctgtggactgacggtgtcgaaggcgacccaatttct
gtttatgccgggtttaacgacttagaagaagcccgctatatcgtcgataccatcaaagaa
aaggtcgatgaagggtttaatcgccgcgatgttgccattctttaccgctccaatgctcaa
tcgcgtttactggaagagacgctgatccgccaaggtatgccctaccgtatttacggaggg
catcgcttctatgagcgcttagagatcaaaaatgccctagcgtacctgcgcctactgctt
aatcgtgatgacgatgcctccctggagcgcgtgattaacgtgcccacccgcgggattggc
acccgcacggtagagattgtgcgccatcgcgcccgagagcaaagcatttcactgtggcag
gcgctgcacgatgccattcaagacggcacgctaaaaggccgtgcagccaacgcggtgcag
acatttgccaacctcattgagcaattagacaacgatgcatctggcctgccgctgcatgaa
attatcgaccacatcaccactcatactggcctgatcgagcatcacaaaagcgagcgcggc
gaaaaaggccaagcgcgcgtggaaaacctggaagaactggtgaccgctgcgcgcgccttt
acccatggcgatgccttcgaaaccccagaggcaggcgaaggcatggcggcgctggaagcg
tttctatccgaagcggcgcttaatgcaggcgaccatgaagccgatgaatttgaagacagc
gtgcagctgatgaccctgcactctgctaagggcttggagtttcccgtagtctttattgct
ggtgttgaagagggcctatttcctcataaaatgtcgatcgaagagccagggcggctcgaa
gaggaaagacgactttgctatgtcggcgttacccgcgcgatgcagaaactctacctgacc
catgccgaaacccgccgcctgcacggcaaagaagtgttccccaggccatcgcgctttcta
cgtgaacttccgccccatctgctggaagaagtccgtctacgtggccacatttcccgcccc
gttaccgcctcacgctcaagttttgcgcaacagcgggttgaaagcgacggcgacctacct
gccctgcatgttggccagcgggtaatgcatccggtgtttggcgaaggcatcattcttaat
gcggaaggcgaaggggcccgcgcccgcgtacaggtcagctttgaaggtgaaggggtgaaa
tggctcgtactagggtttgccaaactcaccccactttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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