KEGG   Halomonas campaniensis: FF32_08465
Entry
FF32_08465        CDS       T03198                                 
Name
(GenBank) exonuclease I
  KO
K01141  exodeoxyribonuclease I [EC:3.1.11.1]
Organism
hcs  Halomonas campaniensis
Pathway
hcs03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hcs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    FF32_08465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hcs03400]
    FF32_08465
Enzymes [BR:hcs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.1  exodeoxyribonuclease I
     FF32_08465
DNA repair and recombination proteins [BR:hcs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     FF32_08465
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     FF32_08465
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      FF32_08465
SSDB
Motif
Pfam: Exonuc_X-T_C RNase_T
Other DBs
NCBI-ProteinID: AIA74870
Position
1866729..1868222
AA seq 497 aa
MAPPNAAPASFLWHDYETFGADPRRDRPAQFAALRTDAELNEIGEPIELYCKPADDYLPH
PAACLITGITPQKAQRKGLPEGEFARQVQGFMSEPGTCVVGYNSLRFDDEISRHLFYRNL
LDPYSREWQNGNSRWDLIDVVRAFYALRPDGIEWPQREDGAPSFKLEHLTAANGIAHEGA
HDAVADVRATIALARLLKARNPKLFDYLLGMRGKRAVAKQLDLPSAKPLLHISRRYPASR
GCSALVMPLAEHPTNPNGVIVYDLSVDPSDLLTMSAEQIRERVFVSQHDLSEGEVRIPLK
VIHINRCPVIFPATVLKDVDGPHKGEYGTIIERLTIDIDACRGHWKTLREASGVAQKVAE
VFNAAYEDVPQDPDLMLYSGSFFSAADRQQMERALAMDPWDLVGQRFAFQDPRLEEMLFR
YRARSYPDTLEGEEREQWDAFRWMRINDPALSGFTLKAFAREIERYNQQILSDRERQVLE
ELVMYVESMMPAQAFDA
NT seq 1494 nt   +upstreamnt  +downstreamnt
atggcgccacctaatgctgcccctgccagttttctctggcatgactatgagacatttggt
gctgatccgcgtcgcgatcggcccgctcagtttgccgcattacgcactgacgccgagctt
aatgaaatcggtgagccgatagagctctactgcaaacctgctgatgactacctgcctcac
cctgctgcttgcctcattaccggtattacaccgcaaaaagcgcagcggaaaggcttgcct
gagggggagtttgcccgccaggtccaaggctttatgagtgagccaggcacttgcgtggtg
ggctataacagccttcgctttgatgatgaaatctcccgccacttgttttatcgcaacctg
cttgacccttattcccgcgaatggcaaaacggcaattcccgttgggacttgattgatgtg
gtgcgcgcgttttacgccttgcgccccgacggcattgagtggccgcagcgggaagatggt
gcgcctagcttcaaacttgagcacttaacggcggccaatggcattgcccatgaaggtgct
catgatgcggtggctgatgtacgtgccaccattgcgctggcgcgtctgctaaaagcccga
aacccaaaattattcgactatttactgggcatgcgtggcaagcgtgcagtggccaagcag
ttagacttgcctagcgctaaaccgcttttgcatatttcccgtcgttaccctgccagccgt
ggctgtagtgcattagtcatgccactggccgagcatccgacgaatcctaatggcgttatt
gtttacgatttaagcgttgatcctagtgatttgctgaccatgagtgccgagcaaatcaga
gaacgtgtgttcgtcagccagcatgacctttccgagggggaagtgcgtataccgctgaaa
gtgatccacattaatcgctgcccagtcatctttccagcgacggtgttaaaagatgtggat
ggcccccataaaggcgaatacggcacgatcattgagcggttaacgattgatattgatgcc
tgtcgcggccattggaaaacgttgcgagaggctagcggtgtggcgcaaaaagtagctgag
gtatttaacgcagcctacgaagatgtgcctcaagaccctgacttaatgctctattccggc
agctttttctctgcggctgatcgccagcaaatggagcgagcattggcaatggatccctgg
gatttagtcggccagcgctttgcctttcaagatcctcgcctggaggaaatgttgtttcgc
taccgtgcgcgtagttatccagacacgctggagggcgaagagcgcgagcagtgggatgcg
tttcgctggatgcgtatcaatgatccggccttgtcgggttttacgctgaaagcctttgcg
cgagagatagagcgttataaccagcagatcctatcggatcgcgagcgccaagtgctggaa
gagttggtgatgtacgttgagtcgatgatgccagctcaggcgtttgatgcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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