KEGG   Halalkaliarchaeum desulfuricum: AArcSl_2335
Entry
AArcSl_2335       CDS       T06283                                 
Symbol
tbp3
Name
(GenBank) transcription initiation factor TFIID TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
hdf  Halalkaliarchaeum desulfuricum
Pathway
hdf03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:hdf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AArcSl_2335 (tbp3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hdf03000]
    AArcSl_2335 (tbp3)
   03021 Transcription machinery [BR:hdf03021]
    AArcSl_2335 (tbp3)
Transcription factors [BR:hdf03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    AArcSl_2335 (tbp3)
Transcription machinery [BR:hdf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     AArcSl_2335 (tbp3)
  RNA polymerase III system
    TFIIIB
     AArcSl_2335 (tbp3)
  RNA polymerase I system
    SL1/TIF-1B
     AArcSl_2335 (tbp3)
SSDB
Motif
Pfam: TBP T4bSS_IcmS DUF218
Other DBs
NCBI-ProteinID: AUX09957
UniProt: A0A343TLI5
Position
2354847..2355407
AA seq 186 aa
MTNPKDTINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFR
SGKIVCTGAKSTADVHESLNIVFDKLRELEIPVEEDPEITVQNIVTSADLGTSLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDEPDVVALLFGSGKLVITGGKEPVDAEAAVDVITGRLE
ELGLLG
NT seq 561 nt   +upstreamnt  +downstreamnt
atgaccaatcccaaggacacgataaacatcgagaacgtcgttgcctccacgggcatcggc
caggagctcgacctccagagcgtcgccatggacctcgagggcgccgactacgaccccgaa
cagttccccgggctggtctacaggacccagaaccccaaatccgcggcgctgatcttccgg
tcggggaagatcgtctgtacgggagcgaagtcgacggcggacgtccacgagagcctcaac
atcgtcttcgacaagctgcgggaactggagatccccgtcgaggaggatcccgaaatcacc
gttcaaaacatcgtcacgagtgcggatctgggaacgagcctcaacctcaacgcgatcgcg
atcgggctcgggctcgagaacatcgagtacgagcccgagcagttcccgggactggtctac
cggctcgacgagcccgacgtcgtggcgctgcttttcggctccggcaagctcgtgataacc
ggcggcaaggagcccgttgacgccgaggccgccgtcgacgtgatcaccgggcggctcgag
gaactcggcctgctgggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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