KEGG   Hartmannibacter diazotrophicus: HDIA_0288
Entry
HDIA_0288         CDS       T05217                                 
Symbol
rsmB_1
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
hdi  Hartmannibacter diazotrophicus
Brite
KEGG Orthology (KO) [BR:hdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hdi03009]
    HDIA_0288 (rsmB_1)
Enzymes [BR:hdi01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     HDIA_0288 (rsmB_1)
Ribosome biogenesis [BR:hdi03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    HDIA_0288 (rsmB_1)
SSDB
Motif
Pfam: Methyltr_RsmB-F NusB Methyltransf_25 FtsJ Methyltransf_11 Methyltransf_31 Methyltransf_23 Methyltransf_12 Cons_hypoth95 adh_short Methyltransf_15
Other DBs
NCBI-ProteinID: SON53829
UniProt: A0A2C9D0W5
Position
1:310862..312304
AA seq 480 aa
MNDAKARPSSSKGTGGAGRPKNKHGGAAGGARKDQAGPREADRTPLPPGHDLRALCADLL
SLVRKGELLDGLLEAGPLSQRFNALEIKDRALVRAIIGTALRRHGQIAEAIAACLDRPLP
QKAGALQSILAIGAAQVLFMDVADHAAIDIAVELAGRSRDTAKWKGLTNAILRRLQRERD
AILARQDEARLNTPGWLFEAWAKAYGTDTARAIAAMHLVEPSLDISVKSDPEGWQEKLGG
KLLPTGSIRLVAAGGVDQLPGYAEGAWWVQDAAAALPPLLLGDVAGKTVADLCAAPGGKT
ALLAARGAHVTAVDLSARRLKRLSANLDRLGLSADVVTADVATYAGGPFDAVLLDAPCSA
TGTIRRHPDLVLLKEPSDIEILAATQARLLHHAVDLVRPGGLLVYCTCSLQPEEGAAQID
ALIASGAPVERVPVRPEEIGGLAGAITPAGDLRTLPSMLPDADPHLAGLDGFFVARLRRR
NT seq 1443 nt   +upstreamnt  +downstreamnt
ttgaacgatgccaaagcccgcccgtcttcctccaagggtacgggcggggccggaaggccg
aagaacaagcacgggggcgccgctggcggcgcgcggaaggatcaggccggtccgcgcgaa
gccgatcgcaccccactgcctccggggcatgatcttcgcgccctttgcgccgatcttctc
tccctcgtgcgcaagggcgagcttctcgacggcctgctcgaggcaggcccgctgtcgcag
cgcttcaatgcgcttgagatcaaggaccgggcgctggtgcgtgccatcatcggcacggcg
ctgcgccgccacggccagatcgccgaggcgatcgccgcctgcctcgaccgtccgctgcct
cagaaggccggcgcgttgcagtcgatcctggcgattggcgcggcgcaggttctcttcatg
gatgtcgccgaccatgcagccatcgacatcgcggtggaacttgccggtcggtcgcgcgat
acggcgaagtggaaggggctcaccaacgccatcctgcgccggctccagcgcgagcgcgat
gcgatccttgcccgtcaggatgaggcccggctgaacacgcccggctggctcttcgaggcc
tgggcgaaggcctacgggaccgacaccgcccgcgccatcgcggccatgcatctcgtcgag
cccagtctcgacatctccgtcaagtcggaccccgagggctggcaggaaaagctgggcggc
aagctgctgccgaccggatcgattcgcctcgtcgcggccggcggcgtcgaccagcttccc
ggctatgccgagggcgcctggtgggtgcaggatgccgccgccgccctgccgccgctgctg
cttggggatgtcgcgggcaagaccgttgccgatctgtgcgccgcgccgggcggcaagact
gcgctgctggccgcgcgcggcgcccatgtcacggcggtcgacctctccgcccgccgcctg
aagcgtctttccgccaatctcgaccggctgggtctttccgctgatgtggtgaccgcggac
gtcgcgacctacgccggcggtcccttcgatgccgtgctgctcgacgcaccctgttcggcg
accggcacgatccgccgccacccggatctggtgctcctgaaagaaccgtccgacatcgag
atcctggcggcaacgcaggcgcgcctgctgcaccacgccgtcgacctcgtgcggccgggt
ggtcttctcgtctactgcacctgttcgctgcagccggaggagggcgcggcccagatcgat
gcgctgatcgcgtccggcgcgccggtggagcgcgtccccgtccggccggaggagattggc
ggccttgccggggctatcacgccggcaggcgacctgcgcacgctgccctcgatgctgccc
gatgcggacccgcatcttgccggtctcgacggtttcttcgtcgcccggctccggcgccgg
taa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (47)   

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