KEGG   Hartmannibacter diazotrophicus: HDIA_1541
Entry
HDIA_1541         CDS       T05217                                 
Symbol
lpdC
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
hdi  Hartmannibacter diazotrophicus
Pathway
hdi00010  Glycolysis / Gluconeogenesis
hdi00020  Citrate cycle (TCA cycle)
hdi00260  Glycine, serine and threonine metabolism
hdi00280  Valine, leucine and isoleucine degradation
hdi00310  Lysine degradation
hdi00380  Tryptophan metabolism
hdi00620  Pyruvate metabolism
hdi00630  Glyoxylate and dicarboxylate metabolism
hdi00640  Propanoate metabolism
hdi00785  Lipoic acid metabolism
hdi01100  Metabolic pathways
hdi01110  Biosynthesis of secondary metabolites
hdi01120  Microbial metabolism in diverse environments
hdi01200  Carbon metabolism
hdi01210  2-Oxocarboxylic acid metabolism
hdi01240  Biosynthesis of cofactors
Module
hdi_M00009  Citrate cycle (TCA cycle, Krebs cycle)
hdi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hdi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
hdi_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:hdi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    HDIA_1541 (lpdC)
   00020 Citrate cycle (TCA cycle)
    HDIA_1541 (lpdC)
   00620 Pyruvate metabolism
    HDIA_1541 (lpdC)
   00630 Glyoxylate and dicarboxylate metabolism
    HDIA_1541 (lpdC)
   00640 Propanoate metabolism
    HDIA_1541 (lpdC)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    HDIA_1541 (lpdC)
   00280 Valine, leucine and isoleucine degradation
    HDIA_1541 (lpdC)
   00310 Lysine degradation
    HDIA_1541 (lpdC)
   00380 Tryptophan metabolism
    HDIA_1541 (lpdC)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    HDIA_1541 (lpdC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hdi04147]
    HDIA_1541 (lpdC)
Enzymes [BR:hdi01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     HDIA_1541 (lpdC)
Exosome [BR:hdi04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   HDIA_1541 (lpdC)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 GIDA NAD_binding_8 FAD_oxidored FAD_binding_3 HI0933_like DAO AlaDh_PNT_C Thi4 2-Hacid_dh_C Lys_Orn_oxgnase 3HCDH_N Amino_oxidase Lycopene_cycl Trp_halogenase
Other DBs
NCBI-ProteinID: SON55082
UniProt: A0A2C9D443
Position
1:1669643..1671082
AA seq 479 aa
MTKNEGKKTMSQYDVIIIGGGPGGYVAAIRSAQLGLKTAVVEAKHLGGICLNWGCIPTKA
LLRSAEIYHYMTHAKDYGLSAEKIGFDAAAIVKRSRGVSAQLNTGVGFLLKKNKVDVIWG
TAKLAKGGKVDVVAADNPPKGALGAGSYTGKNIIVATGARPRVLPGLEPDKKLVWTYFEA
MVPEAMPKSLLVVGSGAIGIEFASFYRTMGAEVTVVEVLPQILPVEDAEIATMAQKRFEK
QGIKIFTETKVTKLDKGANSVTATLELKDGKTQTMTVDRVISAVGVVGNIEGLGLEELGV
KTDRGCIVADPYGKTNVPGIYAIGDVAGPPMLAHKAEHEGVICVEAIAGKHPHAMDKLKI
PGCTYCHPQVASVGLTEKKAKDAGYEVKVGRFPFIGNGKAIALGEPEGLVKTVFDAKTGQ
LLGAHMIGAEVTELIQGFVVAMNLETTEEDLMHTVFPHPTLSEMMHESVLDAYGRAIHV
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgaccaagaatgagggcaagaagaccatgtcccaatatgacgtcatcataattggcggc
ggccctggcggctacgtcgcggctatccgctccgcgcagcttgggctgaagacggctgtt
gtcgaggccaagcacctgggcggcatctgcctcaactggggttgtatcccgaccaaggcg
ctgttgcgctcggccgaaatctaccactacatgacgcatgccaaggactacggcctgtct
gccgaaaagatcggcttcgacgcggccgcgatcgtcaagcgctcgcgcggcgtctcggcc
cagctcaacaccggcgtcggcttccttctgaagaagaacaaggtcgacgtgatctggggc
acggccaagcttgccaagggcggcaaggtggacgtggtcgccgctgacaatccgccgaag
ggcgccctgggcgcgggcagctacacgggcaagaacatcatcgtcgccactggcgcgcgt
ccgcgcgtcctgccgggccttgagccggacaaaaagctggtctggacctatttcgaggcg
atggtgccggaggcgatgccgaagtcgctgctcgtcgtcggctcgggcgcgatcggcatc
gagttcgccagcttctaccgcaccatgggcgccgaggtgaccgtggtcgaggtgctgccg
cagatcctgcccgtcgaggacgccgagatcgcgacgatggcgcaaaagcgcttcgagaag
cagggcatcaagattttcaccgagaccaaggtgaccaagctcgacaagggcgccaacagc
gtgacggcaacccttgagctgaaggacggcaagacccagacgatgaccgtcgatcgtgtg
atttcggccgtcggcgtcgtcggcaacatcgagggcctcggccttgaggaactcggcgtc
aagaccgatcgtggctgcatcgtcgccgacccctatggcaagacgaacgtgccgggcatc
tatgccattggcgacgtcgccggcccgccgatgctggcccacaaggccgagcacgagggc
gtcatctgcgtcgaggcgattgccggcaagcatccccacgcgatggacaagctgaagatc
ccgggctgcacctactgccatccccaggtcgcatccgtcggcctcacggaaaagaaggcg
aaggacgccggctacgaggtcaaggtcggccgcttccccttcatcggcaacggcaaggcg
attgcgcttggcgagccggagggcctggtcaagaccgtcttcgacgccaagaccggacag
cttctcggcgcgcacatgatcggcgccgaggtgaccgagttgatccagggctttgtcgtc
gcgatgaacctggaaacgaccgaggaagacctgatgcatacggtcttcccgcacccgacc
ctctcggagatgatgcacgagagcgtccttgacgcctatgggcgtgcgatccacgtataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (19)   
   Pfam (19)   
All databases (107)   

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