KEGG   Hartmannibacter diazotrophicus: HDIA_P0083
Entry
HDIA_P0083        CDS       T05217                                 
Symbol
TrbB
Name
(GenBank) Conjugal transfer protein TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
hdi  Hartmannibacter diazotrophicus
Pathway
hdi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:hdi00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HDIA_P0083 (TrbB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hdi02044]
    HDIA_P0083 (TrbB)
Enzymes [BR:hdi01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     HDIA_P0083 (TrbB)
Secretion system [BR:hdi02044]
 Type IV secretion system
  Trb secretion system protein
   HDIA_P0083 (TrbB)
SSDB
Motif
Pfam: T2SSE ResIII FtsK_SpoIIIE AAA_16 DEAD nSTAND3 AAA_19 AAA_7 AAA_30 AAA_29 AAA_22 Zeta_toxin IstB_IS21 AAA_28 Sigma54_activat GpA_ATPase SLFN-g3_helicase NACHT NTPase_1 DUF87 PhoH cobW AAA TsaE TrwB_AAD_bind RsgA_GTPase Pox_A32 NB-ARC AAA_23
Other DBs
NCBI-ProteinID: SON58492
UniProt: A0A2C9DDT7
Position
HDIAp1:complement(89161..90132)
AA seq 323 aa
MTASSSQARLVRKLSDALGDVICTALDDASVVEVMLNPDGRLFVERLGVGIGAIGDLLPG
AAEIIIGTVAHALKSEADEERPIISGELPIGGHRFEGLLPPVVSAPSFTIRRRASKLIPL
GEYVVSGVMTELQVRLIRRAVEDRLNIVVSGGTGSGKTTLANAVIAEIVAAAPSHRLLIL
EDTAEIQCAAENTVALHTTDTVDMARLLKSTMRLRPDRIIVGEVRDGAALTLLKAWNTGH
PGGITTIHANSAHSALRRLEQLTAEASQQPMREVIGDAIDLVVSIERTATGRRVRDVMRV
NSFDGTHYETHHHSEIEEDSHAA
NT seq 972 nt   +upstreamnt  +downstreamnt
atgacggcgagttcgtctcaggcccgcttggtgcgcaagctgagtgacgcgctcggagac
gtcatctgcacggcactggatgacgcgagcgtcgtcgaggtgatgctcaatccggacggc
cgactattcgtcgagcgcctcggggtgggcatcggagcaatcggtgacctcctgccgggt
gcagctgagatcatcatcggcaccgtcgcccatgcgctgaagagcgaagcggatgaagag
cggccgattatctccggtgagctgccaattggtggtcatcggttcgagggcttgctgcca
cctgtcgtgagcgcaccaagctttacgatccgccgacgggcttcaaagctcattccgctt
ggcgaatatgtggtgagcggcgtgatgaccgagcttcaggtccgactgatccgccgcgcc
gttgaggatcgcctgaacatcgtcgtctctggagggacgggctcgggcaaaacgaccttg
gccaatgccgtcatcgcagagatcgttgcggcggcgccatcgcaccggctgctgatcctg
gaagacaccgccgagattcaatgcgcggcggagaacaccgtcgcgctgcatacgaccgac
accgtcgacatggcacgtttgctgaagagcacgatgcggcttcggcctgatcggatcatc
gtcggggaggtgagggacggtgccgcactcacattactcaaggcctggaacactggtcat
ccgggcgggatcacgaccatccacgccaactctgcgcactcggcactgcgacggcttgaa
cagctgacggctgaggccagccaacagccaatgcgcgaggtgattggcgacgccatcgat
ctcgtcgtctcgatcgagcgaacggcgacgggcaggcgggtgcgcgatgtcatgcgcgtg
aacagctttgacggcacccactacgaaacacaccaccattccgagattgaagaggacagc
catgcagcttga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (29)   
   Pfam (29)   
All databases (47)   

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