KEGG   Hyphomicrobium denitrificans ATCC 51888: Hden_1366
Entry
Hden_1366         CDS       T01265                                 
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
hdn  Hyphomicrobium denitrificans ATCC 51888
Brite
KEGG Orthology (KO) [BR:hdn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hdn03021]
    Hden_1366
Transcription machinery [BR:hdn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Hden_1366
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_ECF Sigma70_r4 DUF134 HTH_23
Other DBs
NCBI-ProteinID: ADJ23178
UniProt: D8JX42
Position
complement(1418879..1419436)
AA seq 185 aa
MTESPSFGDALIAAMPNLRAFAHSLCGDGQLSNDLVQETLLKAWAHKESFVPGSNLKAWL
FTILRNTYFTHYRKSQREELDQDHAALNASVPPTQLTQLEFEDMRRALMRLSPDHREALL
LITAEGFSYEDAARVCGCAVGTMKSRVNRARSRLVDETSGRSNDGDVAEQHGSESITTPA
KSSGG
NT seq 558 nt   +upstreamnt  +downstreamnt
gtgacggaatctccaagctttggagacgctctgattgcggcaatgcccaatctgcgggca
ttcgcgcactcgctctgcggcgacgggcaactttcgaacgaccttgtccaggaaacgctg
ctcaaagcctgggcgcacaaggagtcgttcgtcccgggttccaatctcaaggcttggctg
tttacaatcttacgcaacacgtactttacacactatcggaaatcccagcgtgaagaactg
gatcaggatcacgccgcgctcaacgccagcgtgccaccgacgcagctcacacagctcgaa
tttgaagacatgcggcgcgccttgatgcggttgtcgcccgaccatcgcgaagcactgctg
ctgataaccgccgaaggattttcatacgaagacgctgcacgcgtctgcggctgcgccgtc
ggcacgatgaaaagccgggtcaaccgcgctcgaagccgcctggtcgacgagacatctggg
cgatcgaacgacggcgatgtcgcggagcagcatgggagcgagagcatcacaacaccggcc
aagagctctggaggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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