KEGG   Hyphomicrobium denitrificans ATCC 51888: Hden_2241
Entry
Hden_2241         CDS       T01265                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
hdn  Hyphomicrobium denitrificans ATCC 51888
Brite
KEGG Orthology (KO) [BR:hdn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hdn03019]
    Hden_2241
   03009 Ribosome biogenesis [BR:hdn03009]
    Hden_2241
   03036 Chromosome and associated proteins [BR:hdn03036]
    Hden_2241
Enzymes [BR:hdn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     Hden_2241
Messenger RNA biogenesis [BR:hdn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Hden_2241
Ribosome biogenesis [BR:hdn03009]
 Eukaryotic type
  90S particles
   RNase
    Hden_2241
 Prokaryotic type
  rRNA processing factors
   Hden_2241
Chromosome and associated proteins [BR:hdn03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     Hden_2241
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DND1_DSRM
Other DBs
NCBI-ProteinID: ADJ24039
UniProt: D8JR54
Position
complement(2294878..2295585)
AA seq 235 aa
MLRPRKFKELETKLGHRFKDPGLLERALTHASVRGGKIARFDNERLEFIGDRVLGLAIAE
ILNQQYPEASEGELARRYNRLVRGEACAKVARNIGLGAHLILSESEADSGGRDKTTILAD
AAEALLGAVFIDVGFEKARAVVRKLWQEQSEPVPEVAVDAKSALQEWAQGQGLALPKYTV
VSRKGPDHAPRFTAEVIIAGRAPAQGEGASKRIAEQAAATALLTREGEGGRLGDA
NT seq 708 nt   +upstreamnt  +downstreamnt
atgttgagacctcggaaattcaaggagcttgagaccaagctcggacaccgcttcaaggac
cccggtcttttggaacgggccctgacgcacgccagcgttcgcggcggaaagatcgcgcgc
ttcgacaacgagcgcctggagttcatcggcgatcgcgtgcttgggcttgcgatcgccgag
atccttaatcagcaatatccagaggcgagcgagggtgaactcgcacgccgctacaaccgg
ctggttcgtggcgaagcctgcgctaaggttgcgcgcaacatcggtctcggcgcacacctc
attctttcggaaagtgaagccgacagcggcgggcgcgacaagacgacgatccttgccgac
gccgcggaagcgctgctcggcgccgtgttcatcgacgtcggtttcgagaaagcgcgcgca
gtcgtccgcaaactgtggcaggaacagtcggagcccgtgccggaagtcgcggtcgatgcc
aagtccgcgctccaggagtgggcgcaaggccagggtttggcattgccgaaatataccgtc
gtctctcgcaaagggccggatcacgcgccacgctttaccgccgaagtcatcattgcgggc
cgcgctccggcgcagggcgaaggcgcatcgaaacgcatcgcggaacaagcggcggcaacg
gcgcttttgacccgcgagggtgaaggaggccgtcttggcgacgcctga

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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