KEGG   Hyphomicrobium denitrificans ATCC 51888: Hden_2325
Entry
Hden_2325         CDS       T01265                                 
Name
(GenBank) ribosomal protein S1
  KO
K02945  small subunit ribosomal protein S1
Organism
hdn  Hyphomicrobium denitrificans ATCC 51888
Pathway
hdn03010  Ribosome
Brite
KEGG Orthology (KO) [BR:hdn00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    Hden_2325
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:hdn03011]
    Hden_2325
Ribosome [BR:hdn03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    Hden_2325
  Bacteria
    Hden_2325
SSDB
Motif
Pfam: S1 Spt6_S1 PCB_OB
Other DBs
NCBI-ProteinID: ADJ24122
UniProt: D8JRQ4
Position
complement(2379249..2380967)
AA seq 572 aa
MSAEVSREMNPSREDFAALLAESLAKDDLFEGSVVKGKIVGIEKDMAIIDVGLKMEGRVA
MKEFGIGGKPGDLKVGDTVEVYLERVENALGEAVLSRDKARREESWTRLERLYEKGEKVT
GVIFNKVKGGFTVDLDGAVAFLPGSQVDIRPVRDIGPLMHQQQPFQILKMDRRRGNIVVS
RRSVLEESRAEQRTEIVARLAEGQIIDGLVKNITDYGAFIDLGGIDGLLHVTDMAWRRVN
HPSEILNVGDTVKVQIIRINPETQRISLGMKQLQSDPWSSIEAKYPVGARVKGTVTNIAD
YGAFVELEPGVEGLIHVSEMSWTKKNTHPGKIVSTSQQVEVQVLEVDPQKRRISLGLKQT
QENPWDGFLTAHPKGSIVEGPIRNITEFGLFIGLDNGIDGMVHLSDLDWQKAGDEVIKDY
KKGDNVKAIVLDVDGAKERISLGIKQLAGDPADAMAKYKKGDAVTCTVTSVSEAGIEVKI
ADSELTSFVKRGDLSRDRSEQRPERFNVGDKVDAAVISVDKAARRIAVSVKALELAEEKQ
AVAQYGSSDSGASLGDIFKAAIKKREGAEDGE
NT seq 1719 nt   +upstreamnt  +downstreamnt
atgtccgccgaagtatcacgtgagatgaacccgtcgcgcgaagattttgccgcgctgctc
gccgagagccttgccaaggacgacctcttcgaaggttccgtcgttaagggcaaaatcgtc
ggcatcgaaaaagatatggcgatcatcgacgttggcctgaagatggaaggccgggtcgcg
atgaaggaattcgggatcggcggcaagccgggcgatctcaaggtcggcgataccgtcgaa
gtctacctggagcgcgtcgagaatgcgctcggtgaggctgtgctgtcgcgcgacaaggcc
cgccgcgaagaaagctggacgcgcctcgagcgtctttatgaaaagggcgagaaggtcacc
ggcgtgatcttcaacaaggtcaagggcggcttcacggtcgacctcgacggcgccgttgcg
ttccttcccggttcgcaggtcgatatccgtccggttcgcgatatcggaccgctgatgcat
cagcagcagccgttccagatcctgaagatggatcgccgtcgcggcaacatcgtcgtctcg
cgccgttcggttctcgaagagagccgcgccgagcagcgcacggagatcgtcgcacgtctc
gccgaaggccagatcatcgacggcctcgtcaagaacatcaccgactacggtgcgttcatc
gacctcggcggcatcgacggcctgctgcacgtcaccgacatggcatggcgtcgcgtcaat
catccgtccgagatcctgaacgtcggcgacacggtgaaggtgcagatcatccgcatcaac
ccggaaacgcagcgtatctcgctcggcatgaagcagctgcagtcggatccgtggtcgtcg
atcgaggcgaagtatccggtcggcgcgcgcgtcaagggtaccgtcacgaacatcgctgac
tacggcgcgttcgttgagctggagccgggcgtcgaaggcctgatccacgtctcggaaatg
agctggacgaagaagaacacgcaccctggcaagatcgtctcgacgagccagcaggtcgag
gttcaggttctcgaggtcgatccgcagaagcgccgcatctcgcttggtctcaagcagacg
caggaaaatccgtgggatggcttcctgaccgcgcatccgaagggctcgatcgtcgaaggt
ccgatccgcaacatcaccgaattcggtctgttcatcggcctcgacaacggcatcgacggc
atggtccacctttccgacctcgactggcagaaagccggcgacgaagtcatcaaggactac
aagaagggtgacaacgtcaaagccatcgtgctcgacgtcgacggtgccaaggagcgcatc
tcgctcggcatcaagcagcttgctggcgacccggccgatgcaatggcgaagtacaagaag
ggcgacgcagtgacctgcacggtgacgtcggtcagcgaagccggcatcgaagtgaagatc
gccgacagcgaattgacgtcgttcgtcaagcgcggcgacctctcgcgcgatcgctccgag
cagcgccccgagcgcttcaacgtcggcgacaaggtcgatgcggccgttatctcggtcgac
aaggcggcacgccggatcgcagtttcggtcaaggcgctcgagcttgccgaagagaagcag
gcggtggctcagtacggatcgtcggattcgggtgcttcgctcggcgacatcttcaaggcc
gccatcaagaagcgcgaaggtgctgaagacggcgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (50)   

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