KEGG   Hyphomicrobium denitrificans 1NES1: HYPDE_24643
Entry
HYPDE_24643       CDS       T02646                                 
Symbol
lysK
Name
(GenBank) lysyl-tRNA ligase
  KO
K04566  lysyl-tRNA synthetase, class I [EC:6.1.1.6]
Organism
hdt  Hyphomicrobium denitrificans 1NES1
Pathway
hdt00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:hdt00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    HYPDE_24643 (lysK)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:hdt01007]
    HYPDE_24643 (lysK)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hdt03016]
    HYPDE_24643 (lysK)
Enzymes [BR:hdt01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     HYPDE_24643 (lysK)
Amino acid related enzymes [BR:hdt01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   HYPDE_24643 (lysK)
Transfer RNA biogenesis [BR:hdt03016]
 Prokaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    HYPDE_24643 (lysK)
SSDB
Motif
Pfam: tRNA-synt_1f tRNA-synt_1g tRNA-synt_1b tRNA-synt_1e
Other DBs
NCBI-ProteinID: AGK56614
UniProt: N0AZN4
Position
complement(414071..415723)
AA seq 550 aa
MTILAFTAAQAASSTASKAWPFEEARRLIKRLERLPGGTDKTVLFETGYGPSGLPHIGTF
GEVARTTMVRRAFELLTEGKRKTRLICFSDDMDGLRKVPTNVPNQAMLQAHLEQPLTRVP
DPFGKFESFAHHNNAMLRDFLDRFSFEYEFFSATECYTSGMFDATLLKMLAVYDKVMDII
LPTLGPERQATYSPFLPVCQRTGRVLQVPMVARDVKAGTITYVDPETNEKIETPVTGGRV
KCQWKADWAMRWTALGVDYEMAGKDLIDSVTLSSKVCKALGGTPPEGFNYELFLDQNGEK
ISKSRGNGLTIEEWLTYASPESLSLFMFQKPKSAKKLYFDVIPRAVDEYLQFLSAYPSQE
PKQQLDNPVWHIHSGAPPQPELPITFGLLLNLVSVSHASNKDVLWGFLRRYAPGATPENN
PILDRLSGYAIRYYEDFIKPTKKFRAPDDVETAALQSLDATLAALPSDAHGDKIQNALLD
VGRAIPRYQDPTKVSPSGGPGVKLDWFQAIYEILLGQERGPRLGTFIALYGIPETRALIA
KALSGSLATA
NT seq 1653 nt   +upstreamnt  +downstreamnt
atgaccatccttgccttcacagccgcacaagccgcctccagcaccgcctcgaaggcatgg
ccgtttgaagaagcccggcgattgatcaagcggcttgaacggcttccgggcggtaccgat
aagacggtcttgttcgaaaccggctacggcccgtcgggtctcccgcacatcggcaccttc
ggcgaggtcgcgcgcacgaccatggttcgccgtgctttcgagctgctgacggagggcaag
cgtaaaacgcgcctgatctgcttctcggacgacatggacggcctgcgcaaggtcccgacc
aacgtcccgaaccaggcgatgctgcaggcccatctggagcagccgctgacgcgcgtcccg
gacccgtttggaaagttcgaaagcttcgcgcaccataacaacgcgatgctgcgcgacttc
ctcgaccgtttttcgttcgaatatgaattcttctcggcaaccgaatgctacacatcgggc
atgttcgacgcgacgctgctaaagatgctcgccgtctacgacaaggtgatggacattatc
ctgccgacgctcggccccgagcggcaagcgacatactcccctttccttcccgtctgccag
cgcaccggccgcgtcctgcaggtcccaatggttgcgcgcgacgtcaaagccggaacgatc
acctacgtcgatcccgaaacgaacgagaagatcgagacacccgtcacaggcggacgcgtc
aaatgccagtggaaggccgactgggcgatgcgctggactgccctcggcgtcgactacgaa
atggcgggcaaggatctcatcgacagcgtcacgctatcgtcgaaggtctgcaaagcgctc
ggcggcacaccgcccgaggggttcaactatgagctctttctcgaccagaacggcgaaaag
atttcgaagtcgcgtggcaacggactgacgattgaggaatggctgacgtacgcgtcgccc
gaaagcctgtcgttgtttatgtttcaaaagccgaagagtgcgaagaagctctatttcgac
gtcatcccgcgcgcggtcgatgaatacctgcagtttctctcggcatatccttcgcaggag
ccgaagcagcagctcgacaatcctgtctggcacattcattccggagcaccgccgcagccc
gagctgccgattacgtttgggttgctgctcaatctcgtatcggtctcgcatgcgagcaac
aaggacgtgctgtggggcttcctgcgccgctatgcgccgggcgcaacgcctgagaacaat
ccgatcctcgatcggctctccggatatgcaatccgctattatgaggatttcataaagccg
acgaagaaattccgtgcccccgacgacgtcgagacagcggcgctgcagagcctcgacgct
acactggcagcgctgccatccgatgcccacggcgacaaaattcagaatgcgctgctcgat
gtcggccgtgccatcccgcgctatcaagacccgacaaaggtcagccctagcggcggcccc
ggcgtcaagctcgactggttccaggccatctacgaaatcctgttgggacaagaacgcggg
cctcggctcggaacgttcatcgcgctctacggaattccggaaacgcgtgcgctcatcgca
aaggcgctcagcggttctctcgcaaccgcctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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