KEGG   Hyphomicrobium denitrificans 1NES1: HYPDE_36313
Entry
HYPDE_36313       CDS       T02646                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
hdt  Hyphomicrobium denitrificans 1NES1
Pathway
hdt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hdt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HYPDE_36313
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hdt03019]
    HYPDE_36313
   03110 Chaperones and folding catalysts [BR:hdt03110]
    HYPDE_36313
   03029 Mitochondrial biogenesis [BR:hdt03029]
    HYPDE_36313
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hdt04147]
    HYPDE_36313
Enzymes [BR:hdt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     HYPDE_36313
Messenger RNA biogenesis [BR:hdt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     HYPDE_36313
Chaperones and folding catalysts [BR:hdt03110]
 Heat shock proteins
  HSP60 / Chaperonin
   HYPDE_36313
Mitochondrial biogenesis [BR:hdt03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    HYPDE_36313
Exosome [BR:hdt04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   HYPDE_36313
  Exosomal proteins of other body fluids (saliva and urine)
   HYPDE_36313
  Exosomal proteins of breast cancer cells
   HYPDE_36313
  Exosomal proteins of colorectal cancer cells
   HYPDE_36313
  Exosomal proteins of bladder cancer cells
   HYPDE_36313
SSDB
Motif
Pfam: Cpn60_TCP1 EAD9
Other DBs
NCBI-ProteinID: AGK58934
UniProt: N0B5V0
Position
complement(2712386..2714029)
AA seq 547 aa
MAAKDVKFAQDARERMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEI
ELEDKFENMGAQMLREVASKTADLAGDGTTTATVLAQAIVREGAKSVAAGSNPMDLKRGI
DLAVQTIVDDLKTNSKKVTKDQIAQVGTISANGDEVVGKKIAEAMDKVGSEGVITVEESK
TLDFELDVVEGMQFDRGYLSPYFITNADKMIAELESPYILIHEKKLSGLQAMLPVLEAVV
QSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAVLTGGTVI
SEDLGIKLETVTLDMLGRAKKVTIDKENTTIVDGSGKKADIEARVKQIKAQIEETTSDYD
REKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGVALLR
AAKSLDTLKPENDDQKVGINIVRKALQAPARQIAANAGEDGSVIVGKILENSKYAFGYNA
QSHEYGDLYSQGVIDPTKVVRCALQDAASVSGLLITTEAMIADVPKKDSGHSHAAPGGMG
GMGGMDF
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggcagctaaagacgtcaagtttgctcaagacgctcgcgagcgcatgctccgtggtgtc
gacatcctcgccaacgcggtgaaggtgaccctcgggccgaagggtcgcaacgtcgtcatc
gaaaagtcgttcggcgcgccgcgcattacgaaggacggtgtgacggtcgccaaggaaatc
gagcttgaagacaagttcgagaacatgggcgcgcagatgctgcgcgaagtcgcttccaaa
acggcagaccttgccggcgacggcaccacgacggccaccgttctcgctcaggccatcgtc
cgcgaaggcgcgaagtccgttgcggccggctccaacccgatggatctgaagcgcggcatc
gatctcgccgtccagacgatcgtcgacgatctcaagacgaactcgaagaaagttacgaag
gatcagatcgcccaggtcggcacgatctcggccaatggcgacgaagtcgtcggcaagaag
atcgccgaagcgatggacaaggtcggttcggaaggcgtcatcacggtcgaggaatcgaag
accctcgattttgagctcgatgtcgtcgaaggcatgcagttcgaccgcggctatctctcg
ccgtacttcatcaccaacgccgacaagatgatcgcagagctcgagagcccctacattctc
atccacgagaagaagctttcgggtctgcaggcgatgcttccggttctcgaagccgtcgtc
cagtcgggcaagcccctcctcatcattgctgaagacgtcgagggcgaagcgctcgcaacg
ctcgtcgtcaacaagctgcgcggcggcctcaaggttgcagccgtcaaggctccgggcttc
ggcgatcgccgcaaggccatgcttgaggacatcgctgtcctgacgggcggcacggtgatc
tcggaagatctcggcatcaagcttgagaccgttacgctcgacatgctcgggcgcgccaag
aaggtgacgatcgacaaggagaacaccacgatcgtcgacggttctggcaagaaggccgac
atcgaagcgcgcgtgaagcagatcaaggcgcagatcgaagagacgacctccgactatgat
cgcgaaaagctgcaggagcgtcttgcgaagctcgccggcggcgtggcggtcatcaaggtc
ggcggcgcaaccgaagtcgaagtcaaggagcgcaaggaccgcgtcgatgacgcgctgcac
gcgacccgcgcggccgtcgaagaaggcatcgttccgggcggtggtgttgcactgctccgc
gctgcgaagtcactcgatacgctgaagcccgaaaacgacgaccagaaggtcggcatcaac
atcgttcgcaaggccctgcaggctccggcccgtcagatcgctgcgaacgctggcgaggac
ggttcggtcatcgtcggcaagatccttgagaactcgaagtacgcgttcggctacaatgct
cagtcgcacgagtacggcgatctctattcgcagggcgtcatcgacccgacgaaggtcgtc
cgttgcgcgctgcaggatgccgcttcggtttcgggcctcctgatcacgacggaagccatg
atcgccgacgtgccgaagaaggacagcggtcattcgcacgctgctccgggcggcatgggc
ggaatgggcggcatggacttctaa

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system