KEGG   Haemophilus ducreyi: HD_1138
Entry
HD_1138           CDS       T00135                                 
Name
(GenBank) probable pseudouridine synthase Rlu family protein
  KO
K06175  tRNA pseudouridine65 synthase [EC:5.4.99.26]
Organism
hdu  Haemophilus ducreyi
Brite
KEGG Orthology (KO) [BR:hdu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hdu03016]
    HD_1138
Enzymes [BR:hdu01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.26  tRNA pseudouridine65 synthase
     HD_1138
Transfer RNA biogenesis [BR:hdu03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    HD_1138
SSDB
Motif
Pfam: PseudoU_synth_2 DUF6483
Other DBs
NCBI-ProteinID: AAP95999
UniProt: P59840
Position
complement(904995..905726)
AA seq 243 aa
MELDILYRDDELIAINKPAGMLVHRSWLDKAETLFAMQTLRDQINQHVFPIHRLDRPTSG
VLLFALNSEMARLMSEQFEQHKVEKEYLAIVRGYIAEKGEIDYPLKVILDKIADKFSQPK
AAQQAVTFYQNLAKVEMPYSTGKYATTRYSLVALSPKTGRKHQLRRHMKHLFHPIMGDTK
YGDLHQNRRLTEKTGCNRLMLHARLLHFTHPKTLQKITISALLDQQWQMLFNQFGWHFTD
FFY
NT seq 732 nt   +upstreamnt  +downstreamnt
atggaacttgatattttataccgtgatgatgaactgattgcaattaataaaccggcggga
atgttagtccatcgttcgtggctggataaagcagaaacattatttgcgatgcaaacattg
cgtgatcaaatcaaccaacacgtttttcctattcaccggctagatcgccctacttcgggc
gtacttttgtttgccttaaatagcgaaatggctcgcttgatgagtgaacaatttgaacaa
cataaagtcgaaaaagaataccttgcgattgttcgtggctatatcgcagaaaaaggtgaa
attgattacccacttaaagtgatattagacaaaattgcggataaattttcccaaccaaaa
gcagcgcaacaagcggtcactttttatcaaaatcttgcaaaagtagagatgccttattcc
acaggtaaatatgccactacgcgttatagtttagttgcattatcaccgaaaacgggcaga
aaacatcagcttagacggcatatgaaacatttatttcatccgattatgggcgatacgaaa
tatggcgatttacatcaaaaccggcgattaactgaaaaaacgggctgtaatcgtttaatg
ttacacgctcgtttgctacactttacccacccgaaaacattgcaaaaaatcaccatttct
gcactgcttgatcagcaatggcagatgttattcaaccaatttggttggcatttcactgat
ttcttttactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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