KEGG   Herbiconiux sp. SALV-R1: HL652_18785
Entry
HL652_18785       CDS       T06594                                 
Name
(GenBank) CCA tRNA nucleotidyltransferase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
hea  Herbiconiux sp. SALV-R1
Pathway
hea03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hea00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HL652_18785
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hea03019]
    HL652_18785
Enzymes [BR:hea01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     HL652_18785
Messenger RNA biogenesis [BR:hea03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     HL652_18785
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2
Other DBs
NCBI-ProteinID: QJU55461
UniProt: A0A6M5J122
Position
complement(3930448..3931890)
AA seq 480 aa
MQSVQQSLAFLASLAESGPVATLAAAFSSAGRELALVGGPVRDAFLGRPITDLDFTTDAR
PDEILELVTPISQAQWDVGRAFGTIAARIDGETVEITTYRSDSYDGESRKPAVEFGDTLE
GDLLRRDFTVNAMALRLPQLVLVDPAHGMDDLIAGVLRTPGAPETSFGDDPLRMLRAIRF
TAQLGFTVDVDTAIAISEMKESIGIVSIERVNDELSKLLKTDAPRRGVELLVESGLADIV
LPEVPALQLERDEHHHHKDVYEHSLTVLDQAIELEKSRAAAGTGIASPDLVLRLAALLHD
IGKPSTKRNEAGGQVTFHHHDVVGAKLAKKRLRALRYDNDTIAAVSRLIELHLRFFGYTD
GAWTDSAVRRYVRDAGDQLERLHILTRADVTTRNRRKADQLSFAYDDLEQRIAVLAEEEE
LAAVRPDLDGEQIMAILGIKPSREVGQAYAYLLEVRLDEGPLSEEEATSRLLSWWQSRTE
NT seq 1443 nt   +upstreamnt  +downstreamnt
gtgcaatcggttcagcagtcgctcgcgttcctcgcctccctggcggagagcggccctgtc
gccacgctcgccgccgccttctcgagtgcgggccgggagctggcgctcgtggggggcccg
gtgcgcgacgccttcctcggccgacccatcaccgatctcgacttcaccaccgacgcccgg
cccgacgagatcctcgagctggtgacgcccatctcgcaggcccagtgggacgtgggccgc
gccttcggcaccatcgccgcgcgcatcgacggcgagacggtggagatcaccacctaccgc
tccgactcctacgacggcgagagccgcaagcccgccgtggagttcggcgacaccctcgag
ggcgatctgctgcgccgcgacttcacggtgaacgcgatggccctgcgtctcccccagctc
gtgctggtcgaccccgcgcacggcatggacgacctcatcgcgggtgtgctgcgcaccccc
ggcgcacccgagacctcgttcggcgacgatccgctccgcatgctgcgtgccatccggttc
accgcccagctcggcttcaccgtcgacgtcgacaccgcgatcgcgatctccgagatgaag
gagtcgatcggcatcgtgtcgatcgaacgcgtgaacgacgagctctcgaaactgctgaag
acggatgcgccccgccgcggcgtcgaactgctcgtcgagagcggcctcgccgacatcgtg
ctgccggaggtgccggccctacagctcgagcgcgacgagcaccaccaccacaaagacgtc
tacgagcacagcctcacggtgctcgaccaggcgatcgagctcgagaagtcgcgcgcggca
gccggcacgggcatcgcctcgcccgacctcgtgctgcggctcgccgcgctgctccacgac
atcggcaagccctcgaccaagcgcaacgaggccggcggccaggtgacgttccaccaccac
gacgtggtgggggcgaagctcgccaagaagcgcctgcgcgccctgcgctacgacaacgac
accatcgcggcggtgtcgcggctcatcgagctgcacctgcgcttcttcggttacaccgac
ggggcgtggaccgactccgctgtgcgacgctacgtgcgcgacgcgggcgaccagctcgaa
cgtctgcacatcctcacccgggccgacgtcaccacccgcaaccggcgcaaggccgaccag
ctctccttcgcctacgacgacctcgagcagcgcatcgccgtgctcgccgaggaggaggag
ctcgccgcggtgcggcccgacctcgacggtgagcagatcatggcgatcctcggcatcaag
ccgtcacgtgaggtgggccaggcctatgcctatctgctcgaggtgcgcctcgacgagggc
cccctctcggaggaggaggccacgtcgcggctcctcagttggtggcagtcccgtaccgag
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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