KEGG   Herbaspirillum sp. meg3: hmeg3_02600
Entry
hmeg3_02600       CDS       T05024                                 
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
hee  Herbaspirillum sp. meg3
Brite
KEGG Orthology (KO) [BR:hee00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hee03016]
    hmeg3_02600
Transfer RNA biogenesis [BR:hee03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    hmeg3_02600
 Prokaryotic type
   Methyltransferases
    hmeg3_02600
SSDB
Motif
Pfam: MnmE_helical TrmE_N MMR_HSR1 FeoB_N RsgA_GTPase Dynamin_N AIG1 Ras MCM Roc Arf
Other DBs
NCBI-ProteinID: ASU41207
UniProt: A0A223PGL5
Position
567060..568466
AA seq 468 aa
MTLDTSPIAAIATAPGRGGIGVVRISGKNLWPVVQAICGKDESSLTPRQATYLPFKRADG
SAIDQGLAIYFKAPHSYTGEDVLELQGHGGPVVMQMLLARCLEAGAEIGLRLAEPGEFTQ
RAFLNDKLDLAQAEAVADLIEASTEAAAKSASESLSGAFSKVIHDLVNKVTNLRMLVEAT
LDFPEEEIDFLEQSDARGQLAAIRATLDDVFMHASQGALLRDGLNVVLAGKPNVGKSSLL
NVLAGSDVAIVTPIAGTTRDKVTETIQIEGMPLNIIDTAGIREAGDDGSGPDEVERIGIE
RTWGEVAKADVILHMLDADRGPTLEDEKITERFPDGVPVIRIWNKIDRSGHKPAVDQMSD
ATHIYLSATDHLGIDLLRGELLRIAGWQQTVESRYLARERHLIALKAAREYLESAAAHAS
VDNQASDKSLDLFAEELRLAQERLSSITGKFTPDDLLGVIFSRFCIGK
NT seq 1407 nt   +upstreamnt  +downstreamnt
atgactcttgatacttctcccattgccgccattgcgaccgccccgggacgcggcggcatc
ggtgtggtccgcatctccggcaaaaatctgtggccggtggttcaagccatctgcggcaag
gatgaaagctcgctgacgccgcgtcaggcgacctatctgccgttcaagcgtgctgacggc
agtgccatcgaccaggggctcgccatctatttcaaagcgccgcattcctataccggtgaa
gacgtgctggagttgcaaggccacggcgggccggtcgtcatgcaaatgctgctggcacgc
tgccttgaggccggtgccgagatcggcctgcgtctggcggagccaggtgagttcacgcag
cgcgctttcctcaacgacaagctcgatctggcgcaggccgaagcggtcgccgacctgatc
gaagcatcgacggaagcagccgccaagtcggcttcagaatccttgtccggcgctttctca
aaagtcatccacgatctggtcaacaaggtcaccaacttgcgcatgctggtcgaagcgaca
ctcgatttcccggaggaagaaatcgacttcctcgagcagtctgatgcgcgcggccagctt
gccgcaattcgcgccacactcgacgatgtcttcatgcacgcctcacaaggcgccttgctg
cgcgacggcctcaatgtggtgttggcggggaagcccaatgtcggcaaatcgtcgctgctc
aacgtgctggccggttccgatgtcgccatcgtcacaccgatcgccggcaccacgcgcgac
aaggtgaccgagacgattcagatcgaaggcatgccgctcaatatcatcgatactgccggc
atccgtgaagcgggcgatgacggtagcggccccgacgaagtggagcgcatcggcatcgaa
cgcacctggggtgaagtcgccaaagctgacgtcatcctgcacatgctcgacgctgaccgt
gggccgacactggaagatgaaaaaatcaccgagcgttttccggacggtgttcccgttatc
cgcatctggaacaagatcgaccgttccggccacaagccggctgttgatcagatgtctgac
gcgacgcatatttatctgtccgccaccgatcacctcggtatcgatttgctgcgcggagaa
ctgctacgcatcgccggctggcagcagacggtggagtcgcgctacctggcgcgcgagcgt
catctgatcgctttgaaggcggcgcgcgaatatctggaaagcgcagccgcgcacgcgtcg
gtcgacaatcaggccagcgacaagtcactcgatttgtttgcggaagaactgcgtctggcg
caggagcgcttgagcagcattaccggcaagttcacaccggacgatttgctgggggtgatc
ttctcgcgcttctgtataggcaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (27)   

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