KEGG   Helicobacter pylori F16: HPF16_0625
Entry
HPF16_0625        CDS       T01910                                 
Symbol
ddl
Name
(GenBank) D-alanyl-alanine synthetase A
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
hef  Helicobacter pylori F16
Pathway
hef00470  D-Amino acid metabolism
hef00550  Peptidoglycan biosynthesis
hef01100  Metabolic pathways
hef01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:hef00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    HPF16_0625 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    HPF16_0625 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    HPF16_0625 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:hef01011]
    HPF16_0625 (ddl)
Enzymes [BR:hef01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     HPF16_0625 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:hef01011]
 Precursor biosynthesis
  Amino acid ligase
   HPF16_0625 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp ATP-grasp_4 ATPgrasp_TupA GARS_A RimK
Other DBs
NCBI-ProteinID: BAJ55222
Position
complement(626372..627415)
AA seq 347 aa
MEFCVLFGGASFEYEISIVSAIALKEALKDRIKYFIFLDENHHFYLIEESNMHSKYFAQI
KEKKLPPLILTHNGLLKSSFLGAKTIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPR
IEASVLSYNKYLTKLYAKDLGVKALDYVLLNEKNCANALNLIGFNFPFIIKPSNAGSSLG
VSVVKEEKELIYALDGAFEYSKEVLIEPFIQGVKEYNLAGCKIKKDFCFSYVEEPNKQEF
LDFKQKYLDFSRNKAPKANLSSALEEQLKENFKKLYNDLFDGALIRCDFFVIENEVYLNE
INPIPGSLANYLFDDFKTTLENLAQSLPKTPKIPIKNSYLLQIQKNK
NT seq 1044 nt   +upstreamnt  +downstreamnt
gtggaattttgcgttttatttggtggggcgagttttgagtatgaaatcagcattgtgagt
gcgatcgcgcttaaagaagcgctaaaggataggattaaatactttatttttttagatgaa
aaccatcatttttacttgattgaagaatccaacatgcattcaaaatacttcgctcaaatc
aaagaaaaaaaattaccccccctaatccttacgcataatggcttgcttaagagctcgttt
ttaggtgctaagactatagaattgcctttagtgatcaatcttgtgcatgggggcgatggc
gaagatgggaaattagcgagcttgttagaattttatcgtatcgcttttataggccctagg
attgaagcgagcgtgttgagttataacaaatatttaaccaagctttacgccaaagactta
ggggtaaaggctttagattatgttcttttgaatgaaaaaaactgcgctaacgctctaaat
ttgattggctttaattttcctttcatcatcaagcccagtaacgccggtagctctttaggg
gtgagcgttgtgaaagaagaaaaagaattgatttacgctttagacggcgcgtttgaatat
tctaaagaggtcttaatagagcctttcattcagggagtgaaagaatacaatttagccggt
tgcaagatcaaaaaggatttttgtttttcctatgttgaagagcctaacaaacaggaattt
ttagatttcaaacaaaaatatttggatttttcacgcaacaaagcccctaaagcgaatctt
tctagcgccctagaagaacaattgaaagaaaattttaaaaaactctataacgatttgttt
gatggcgcgcttattcgttgcgatttttttgtcatagaaaatgaagtgtatcttaatgag
atcaaccccattcctggcagtttggctaattatttgtttgatgattttaaaacaacgcta
gaaaatttagcgcaatcattacccaaaacccctaaaatcccaatcaaaaactcttatttg
ttgcaaatccaaaagaataagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (26)   

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