KEGG   Helicobacter pylori F16: HPF16_0706
Entry
HPF16_0706        CDS       T01910                                 
Name
(GenBank) putative outer membrane protein
  KO
K09953  lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
hef  Helicobacter pylori F16
Pathway
hef00540  Lipopolysaccharide biosynthesis
hef01100  Metabolic pathways
Module
hef_M00867  KDO2-lipid A modification pathway
Brite
KEGG Orthology (KO) [BR:hef00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00540 Lipopolysaccharide biosynthesis
    HPF16_0706
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:hef01005]
    HPF16_0706
Lipopolysaccharide biosynthesis proteins [BR:hef01005]
 Lipid A
  HPF16_0706
SSDB
Motif
Pfam: LpxR
Other DBs
NCBI-ProteinID: BAJ55303
Position
715935..716936
AA seq 333 aa
MFFKFVLCLLLGTFAWAKEDILTPLTPSKRYSINLMTENDGYINPYIDEYYTAGNQIGFS
TKEFDFSKNKAMKWTSYLGFFNKSPRVTRFGISLAQDMYTPSLENRKLVHLHDNHPYGGY
LRVNLNVYNRHQTFMELFTLSLGATGQDSLAAQTQRLIHKWGHDPQFYGWNTQLKNEFIF
ELHYQLLKKVPLLKTRFFSMELMPGFNVELGNARDYFQLGSLFRAGYNLDADYGVNKVNT
AFDGGMPYSDKFSIYFFVGAFGRFQPLNIFIQGNSPETRGIANLEYFVYASEIGAAMMWR
SFRVAFTITDISKTFQSQPKHHQIGTLELNFAF
NT seq 1002 nt   +upstreamnt  +downstreamnt
ttgtttttcaaatttgttttatgtttattattaggaacgtttgcatgggcaaaagaggat
attcttaccccattaacgccctctaaacgctattctatcaatttgatgactgaaaatgat
ggttatatcaacccttacattgatgagtattataccgcaggcaaccaaataggcttttct
actaaagagtttgatttttctaaaaataaagcgatgaaatggacttcgtatttagggttt
ttcaataaaagccctagggttacccgttttggcatttctctcgcccaagatatgtatacc
ccttcacttgaaaacagaaaactggtgcatttgcatgacaaccacccttatggggggtat
ttgagggtgaatttgaatgtgtataaccgccatcaaactttcatggagttattcacgctt
tctttaggcgcaacagggcaagattctttggccgctcaaacgcagcgtctcattcataaa
tggggccatgatccccaattttatggctggaacacacagctcaaaaacgaatttatcttt
gaattgcactaccaattgctcaaaaaagtcccccttttaaagactcgttttttttctatg
gagttaatgcctgggtttaatgtggaattgggtaatgcgagggattatttccaactcggc
tcgctctttagggctgggtataacttggacgctgattatggggtcaataaggtcaatacc
gcttttgatggaggcatgccttatagcgataaattttccatctatttttttgtaggggct
tttgggcgcttccaaccccttaacatcttcattcaaggcaatagccctgaaactaggggc
attgctaatttggaatactttgtttatgccagtgaaataggagcggctatgatgtggcgc
agctttagagtggcttttacgatcactgatattagtaaaacctttcaatcccagcctaaa
caccaccaaatcggcactttagaattgaatttcgccttttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (19)   

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