KEGG   Helicobacter pylori Gambia94/24: HPGAM_05620
Entry
HPGAM_05620       CDS       T01917                                 
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
heg  Helicobacter pylori Gambia94/24
Brite
KEGG Orthology (KO) [BR:heg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:heg03016]
    HPGAM_05620 (truA)
Enzymes [BR:heg01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     HPGAM_05620 (truA)
Transfer RNA biogenesis [BR:heg03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    HPGAM_05620 (truA)
 Prokaryotic type
    HPGAM_05620 (truA)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-ProteinID: ADU81912
Position
1144003..1144731
AA seq 242 aa
MRCFKATIAYDGAYFLGYAKQPNKLGVQDKIESALNALGIKSGVIAAGRTDKGVHANNQV
LSFHAPKHWNAAKLFHYLAPKLAPHIVLKKLEEKNFHARFDAQKRAYRYLLTKNLKTPFL
APYIACGDYGSLDLLNTALKQFIGKHDFSMFKKEGGAATNPNRIIFNALAYKTFIMGHEC
VAFKIIGDAFLRSSVRLIIQACVQYSLEKITLAEIQAQIHNLKATIRTPIMANGLYLHRV
YY
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcggtgttttaaggctactatcgcttatgatggggcgtattttttaggctatgccaaa
cagcccaacaaacttggcgttcaggataaaatagaaagcgctttaaacgcgctagggatt
aaaagcggcgtaattgcggctgggcgcacggataaaggcgtgcatgcgaacaaccaagtg
ttgtcttttcacgctccaaaacactggaatgccgctaaattgtttcattatctagccccc
aaactcgccccccatattgtcttaaaaaaactagaagaaaaaaacttccatgcgcgtttt
gacgctcaaaaaagagcgtatcgttaccttttgacgaagaatttaaaaacgcctttttta
gcgccttatatcgcttgtggggattatggctcactagatttattaaataccgctttaaag
caatttataggtaagcatgatttttccatgtttaaaaaagaaggcggcgctgcaaccaac
cctaatcgcatcatttttaacgctttggcttataaaacctttatcatggggcatgagtgc
gtggcgtttaaaatcattggcgatgcgtttttacgctccagcgtgcgtttgatcattcaa
gcatgcgttcaatattccttagagaaaatcacgctcgctgaaattcaagcgcaaatccat
aacctcaaagccactataagaacgcccataatggctaatggcttgtatttgcacagggtg
tattattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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