KEGG   Halomonas elongata: HELO_3050
Entry
HELO_3050         CDS       T01311                                 
Symbol
trmA
Name
(GenBank) tRNA/tmRNA (uracil-C(5))-methyltransferase
  KO
K00557  tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
Organism
hel  Halomonas elongata
Brite
KEGG Orthology (KO) [BR:hel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hel03016]
    HELO_3050 (trmA)
Enzymes [BR:hel01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     HELO_3050 (trmA)
Transfer RNA biogenesis [BR:hel03016]
 Prokaryotic type
  tRNA modification factors
   Methyltransferases
    HELO_3050 (trmA)
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_25 Methyltransf_31 Methyltransf_11 Methyltransf_4 MTS Methyltransf_15 Methyltransf_12 Methyltrans_SAM tRNA_m1G_MT TPMT RrnaAD TPR_7
Other DBs
NCBI-ProteinID: CBV42934
UniProt: E1V4J6
Position
complement(2408548..2409654)
AA seq 368 aa
MAIPVVDPPRYDEQLDAKRARLVETFAPFAPPALEVYPSPPSHYRQRCEFRLWHEGDDLF
YAMFEVDPDEPGKKRVVRLDDYPVAGRRINELMPRLLDAVRDRPVLRHKLFQVEFLTTLS
GEALVTLIYHRQLDEDWDEAARELEQALDIMIIGRARKQRRVLTRDHVWECLEVDGRRLH
YQQVENSFTQPNAEICRAMLTWARDVTAGSQQRDLVELYCGNANFTVALADNFRRVLATE
ISRTSVASARENLEANGIDNVTVGRMSAEEFTQALKGDKGGRRVEAWALDEYDFSTVLVD
PPRAGLDEASCRQLSEYERIVYISCNPDTLAHNLETLTQTHAVTRFALFDQFPWTHHCEC
GVLLERRA
NT seq 1107 nt   +upstreamnt  +downstreamnt
gtggccattcccgttgtcgatcctccccgttatgacgagcagctcgacgccaagcgcgcg
cgtctcgtcgagacctttgctcccttcgctccgccggcactcgaggtctatccgtcgccg
cccagtcactatcgtcagcgctgcgagtttcgcctctggcacgagggtgatgatctcttc
tatgccatgttcgaggtcgaccccgacgagcccggcaagaaacgtgtggtgcgtctggac
gactatccggtcgccggccggcgcatcaacgagctgatgccgcggctgctcgatgcggtg
cgcgaccggccggtgttgcgccacaagctgtttcaggtggaatttctcaccaccctgtcc
ggcgaggcgctggtcaccctgatctatcatcgccagctcgacgaggactgggacgaggcc
gctcgcgagctcgagcaggcactcgatatcatgatcatcgggcgtgcccgcaagcagcgc
cgggttctgacccgggatcacgtctgggaatgcctggaggtcgatggccgccgcctgcat
taccagcaggtcgagaacagcttcacccagcccaatgccgagatctgccgcgccatgctc
acctgggcaagggatgtcaccgccggcagccagcaacgcgaccttgtcgagctgtattgc
ggcaatgccaatttcacggtggccctggccgacaacttccggcgggttctggccaccgag
atctcgcgtacctcggtggccagtgcgcgggagaatctcgaggccaatggcatcgacaac
gtgacggtggggcgcatgtccgccgaggaattcacccaggcgctcaagggcgacaagggc
ggccggcgtgtcgaggcctgggcgctcgacgagtacgatttctccacggtgctggtcgac
ccgccccgcgccggattggacgaggcgagctgtcgccaactgagcgagtatgagcgtatc
gtctatatttcatgcaacccggatacgctggcgcacaacctggaaacgttgacacagacg
cacgccgtgacgcgttttgcgcttttcgatcagtttccctggacccatcattgcgagtgc
ggggtgctgctggagcgacgagcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (58)   

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