KEGG   Halomonas elongata: HELO_3545
Entry
HELO_3545         CDS       T01311                                 
Name
(GenBank) exonuclease domain protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
hel  Halomonas elongata
Pathway
hel03030  DNA replication
hel03430  Mismatch repair
hel03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HELO_3545
   03430 Mismatch repair
    HELO_3545
   03440 Homologous recombination
    HELO_3545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hel03032]
    HELO_3545
   03400 DNA repair and recombination proteins [BR:hel03400]
    HELO_3545
Enzymes [BR:hel01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HELO_3545
DNA replication proteins [BR:hel03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HELO_3545
DNA repair and recombination proteins [BR:hel03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HELO_3545
SSDB
Motif
Pfam: RNase_T DUF4794
Other DBs
NCBI-ProteinID: CBV43429
UniProt: E1V7J1
Position
complement(2988521..2989147)
AA seq 208 aa
MFKTLRRAADRRRYADSRYGWLFQPYTGDEMVAVACRSTEPAERHGEPMAIAAVRLSGDR
VLTSESLDLHVRQPAGFTQETVRRHGLRGIDLDDGESLDKALERFLDFVGNRPLVGWNLE
GELALLNRGLRPRFGFDLPNAAIDVAPLYQRRQRYRHPQLEGRPRFEEAAERLEVPMMGR
HSALGDAVTTALMYLRLMRDDSARRRSS
NT seq 627 nt   +upstreamnt  +downstreamnt
atgttcaagacattgcgacgagcggccgatcgacgacgctacgccgatagccgctacggc
tggctcttccaaccttataccggcgatgaaatggtcgccgtggcttgccgctccaccgag
ccggccgagcgccatggcgagccgatggccattgccgccgtacggctgagcggtgaccgg
gtcctgaccagcgagtcgctcgacctgcatgtgcgccagccggccggattcacgcaagag
accgtgcgccgacacgggctgcgcggcatcgatctggatgacggcgaatccctggacaag
gccctggaacgctttctggatttcgtcgggaatcggcccctggtggggtggaacctggag
ggcgagctggccctgctgaatcgtggcttgcggccacgtttcggtttcgacctgcccaac
gcggccatcgatgtggcaccgctctaccagcgacgccaacgctatcgtcatcctcagctc
gagggtcggccgcgtttcgaagaggccgccgagcggctcgaagtgccgatgatgggccgc
cacagtgcgctgggcgatgcggtgaccaccgccttgatgtacctgcgtctgatgcgcgat
gacagcgcccggcggcgcagcagctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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