KEGG   Halomonas elongata: HELO_4050
Entry
HELO_4050         CDS       T01311                                 
Symbol
tfc6
Name
(GenBank) secretion cluster MPF-G coupling protein
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
hel  Halomonas elongata
Brite
KEGG Orthology (KO) [BR:hel00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hel02044]
    HELO_4050 (tfc6)
Secretion system [BR:hel02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   HELO_4050 (tfc6)
SSDB
Motif
Pfam: TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: CBV43934
UniProt: E1VA46
Position
3577741..3579945
AA seq 734 aa
MKQTHPLESLLRPAVEFNTTWVCLGCAVLCLYAPWSIALSPSVGWGMAAAFLVLGGWRAH
QGWTVLRYRRNMRRLPRFALRSDQIPVSSRSLWLGKGFKWEARHTQRLYDSQQPEAEAYI
QPPRRYRWARAIEQRLEGIRSLYFVIRLLSADTALNPVRPLPPVGGVAALHAVEWKEGSV
WMPLGERVGHTLVEGTTRVGKTRQAEVMITQDIHRVTHGDHEVVVCFDPKGDADLMLRMY
IEAIRAGRGDEFYVFHLGFPELSARYNAVGRFGRISEVATRIAGALPNEGNSAAFREFAW
RFVNIVARARHALGQRPSYEQILTDVVNIDSLLIEYARQTFEQQFPGAWEKIAAMEGQYN
DKNTPKNLQGRHKRVVAIVEYLQSPDINVSDSVLEGLLSAVRYDKTYFDKIVASLLPLLE
KLTSGQIAELLSPDYHDLEDTRPIFDWQQIVRKRGIVYIGLDALSDFEVAQAVGNSMFAD
LVSVAGHIYKHGVDDGMPGQSSGKVAINLHCDEFNELMGDEFIPLINKGGGAGIQVTAYT
QTLSDIEARIGNAAKAGQVVGNFNNLIMLRVRENKTAMQLTDQLHKVPIATRMLVSMAGD
NSDIDSDVDFSSSGGDRISTAPQPKLEPADIINLPKGQAFALLEGGQLWKIRMPLPKPDK
GKDIPANINDMAQQMRKRYNTGDRWWESVAPPPIEIDPELTAAAAGSPTVANPPPAPAEP
GLEVPGDDGMDVDD
NT seq 2205 nt   +upstreamnt  +downstreamnt
atgaaacaaacccatccgctcgagtcgttgctccgccccgccgtcgagttcaacaccacc
tgggtgtgcctgggctgtgcggtgctctgcctgtatgccccctggtccatcgcgctctcg
ccgagtgtcggctggggcatggcagcggcctttctggtcctgggcggatggcgggcccat
caggggtggacggtgttgcgctatcgccgcaatatgcgccgcctgccgcgcttcgcgctg
cgcagcgaccagatcccggtcagctcgaggagcctgtggttgggaaaaggcttcaagtgg
gaggcgcgtcatacccaacggctctacgacagtcagcagcccgaagccgaagcctatatt
cagccaccacgccgctatcgctgggcacgagccatcgagcaacgcctggaaggcattcgc
tcgctgtatttcgtcatccgcctgctcagtgccgataccgccttgaacccggtgcgtcct
ctgccccctgtgggtggggtagccgcgctgcatgccgtcgaatggaaagagggttcggtt
tggatgccgctgggcgagcgggtcggccacaccctggtcgaaggcacgacgcgcgtcggc
aagacgcgtcaggccgaggtgatgatcacccaggacatccatcgggtcacccacggcgat
cacgaagtggtggtgtgcttcgatcccaagggcgatgccgacctgatgctgcgcatgtat
atcgaggccatccgggccggacgcggcgatgaattctacgtcttccatctcggttttccg
gagctgtcggcccgttacaacgcggtgggtcgcttcggccggatctcggaagtcgcgacc
cggatcgccggggcgttgcccaacgaaggcaacagcgctgccttccgcgagttcgcctgg
cgtttcgttaacattgtcgcgcgggcgaggcacgcgctgggccaacggcccagctacgag
cagatcctcactgacgtcgtcaacatcgacagcctgttgatcgagtacgcccgccagacc
ttcgagcagcagttccccggcgcctgggaaaagatcgcggcgatggaaggccagtacaac
gacaaaaacacgccgaagaacttgcagggacgccataagcgcgtggtagcgattgtcgaa
taccttcagagccctgatatcaacgtcagcgatagcgtcctcgagggcttgttgtcagcg
gtcagatacgacaagacgtatttcgacaagatcgtcgccagtctgctgccgcttttggag
aaattgaccagcggccagatcgccgagttgctttccccggactatcacgacctggaagac
actcgcccgatcttcgactggcaacagatcgtgcgcaaacgcggcatcgtctatatcggc
ttggatgcgctctcggatttcgaggtggctcaagcggtaggcaactcgatgttcgccgac
ctggtgtcggtcgccgggcatatctacaagcacggcgtcgatgacggcatgccgggccag
tctagcggcaaagtggccatcaacttgcactgtgatgagttcaacgagctgatgggcgac
gagttcattcccttgatcaacaaagggggcggtgcagggattcaagtgaccgcttatacc
cagaccctgtccgacatcgaggccaggatcggcaatgccgccaaagcgggccaagtcgtc
ggcaacttcaacaacctcatcatgctgcgcgtgcgcgagaacaagaccgccatgcagctc
accgaccagctccacaaagtgccgatagccacgcgcatgctggtctccatggcgggggat
aacagcgacattgacagcgatgtcgatttctcaagctccggaggagaccggataagcact
gcgccgcagcccaagctggaacccgccgatatcatcaacctgcccaaggggcaggccttc
gcgctgctcgagggcggccagctctggaagatccgcatgccgttgcccaaacccgacaag
ggcaaggacatcccggccaatatcaacgatatggcccagcagatgcgcaagcgctacaac
accggcgatcgctggtgggagtcggtggcgccgccgccgatcgaaatcgaccccgagctg
accgcggcggccgccggctcgccgacggtggccaacccgccgccggcgccggcagaaccc
ggattggaggtcccgggggatgatgggatggacgtcgatgattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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