KEGG   Helicobacter pylori 26695: C694_02235
Entry
C694_02235        CDS       T02282                                 
Name
(GenBank) DNA topoisomerase I (topA)
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
heo  Helicobacter pylori 26695
Brite
KEGG Orthology (KO) [BR:heo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:heo03032]
    C694_02235
   03400 DNA repair and recombination proteins [BR:heo03400]
    C694_02235
Enzymes [BR:heo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     C694_02235
DNA replication proteins [BR:heo03032]
 Prokaryotic type
  DNA Topoisomerases
   C694_02235
DNA repair and recombination proteins [BR:heo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      C694_02235
SSDB
Motif
Pfam: Topoisom_bac Toprim
Other DBs
NCBI-ProteinID: AFV41659
Position
complement(457303..459336)
AA seq 677 aa
MKDSVIIIESPNKVEKIKQLTGAEVYATIGHFTNLIGVDIENNFACKFEIKEDKAKKINF
LINACRDKKVYIATDPDREGYGIGYQFYEKIKNVASEIYRAEFHEITPSGIESGLKNAVL
FSRSNTNLYQSFLGRIASDQVVGFALTSYLRKSLNLSELSAGRVQTPALALICQRDQEIR
DFDKLDAEEKVEYQIQANIVCNEKEAIIKHVRANEKNELVDFKFKDKNEASQFLKDLKDG
LGSMSVLVSLKESLSNKEPKKPFTTSKLLSQASKSLKIPTKEIAQLAQKLFEAGLITYHR
TDSEFLSPEYLKEHEVFFEPIYPSVYQYREYKAGKNSQAEAHEAIRITHPHALKDLEKVC
SDAKISEELALKLYQLIYTNTICSQSRNALYNQYDCIFKIKSESFKLSFKLLKEKGFLEI
EELIQGKEEINREEQESEIENFSLKENDSVPLKEVFIKKIEKPSPKPYKESAFIPLLESE
GIGRPSTYASFLDLLLKRKYISIDTKTNAITPTSQGLEVISFFKKDKEVDFIALTSKDKS
KLGNTTKQFEECLDLIMRGEASYEKFMLEVISKLKSTAKFYQTQSTDNNMPTDKQLELID
KICKDKKLQKPSQEILQNKEKCSDWIAEHVKEKPSQKQLNLVKKICEECKLAMPTNKILN
DKFAISKWIDKHKKTKK
NT seq 2034 nt   +upstreamnt  +downstreamnt
atgaaagatagcgtgattatcattgaaagccctaataaggttgaaaagattaaacaacta
acaggtgcggaagtttatgcaactatagggcattttactaaccttataggcgtagatatt
gaaaataattttgcttgtaagtttgaaatcaaagaagacaaggctaagaaaataaatttt
ttaatcaatgcttgtagggacaaaaaagtctatatcgctactgaccctgatagagagggc
tatggtattggctatcaattttatgaaaaaattaaaaatgtagctagtgaaatttatcgt
gcagaatttcatgagatcacaccaagcggtattgaaagcggcttaaaaaatgcggtgtta
ttttctcgttctaacactaatttataccaatcattcttaggtaggattgcaagcgatcag
gttgttggatttgctctaacaagctatttaagaaaaagtttaaatcttagtgaattgagc
gctggtagagtgcaaactccagctctagctttaatctgccaaagagatcaagaaataagg
gattttgataagttggatgctgaagaaaaagtagaatatcaaatccaagctaatattgtg
tgcaatgaaaaagaagcgattattaagcatgtaagagcgaatgaaaaaaacgaactagtg
gattttaaatttaaagacaaaaacgargcatctcaatttttaaaagatctaaaggacgga
ttagggtctatgagtgttctagtttcattaaaagaaagtctatccaataaagaacccaaa
aaacctttcaccacctctaaacttttatcccaagcgagcaaatccttaaaaatacccact
aaagaaatcgcacaacttgctcaaaaactctttgaagctggtctcatcacttatcacaga
actgatagtgagtttttaagtcctgagtatctcaaagaacatgaagtgttttttgaacct
atttatccgagtgtttatcaatacagggaatataaagctggcaaaaactcacaagctgaa
gcgcatgaggctataagaattacacatccgcatgctttaaaagacttagaaaaagtgtgc
agtgacgctaaaataagcgaagaattagcgctgaagttgtatcaacttatttataccaat
acaatttgttctcaaagtagaaacgccttatacaatcaatacgattgtatctttaaaatc
aaaagcgagagttttaagctctctttcaaacttttaaaagaaaagggttttttagagatt
gaagaactcattcaaggcaaagaagaaattaacagggaagagcaagaaagtgaaatagaa
aacttttcattaaaagaaaatgatagtgtcccgttaaaagaagtttttattaaaaaaata
gaaaaacccagtcccaaaccttataaagaaagtgcctttattcccttattagaaagcgag
gggattggtcgtcctagcacttatgcgagcttcttagatcttcttttgaagcgtaaatat
attagcattgatacaaaaactaacgccatcacccctactagtcaaggattagaagtgatt
tcatttttcaaaaaagataaagaagtggatttcatcgctcttacaagcaaggataagagc
aaattaggaaacactaccaaacaatttgaagaatgtttggatttaattatgagaggtgaa
gctagttatgaaaagttcatgcttgaagtcataagcaaattaaaaagtaccgccaagttt
tatcaaacacaatctactgacaacaacatgcctactgataagcaacttgaactcatagac
aaaatctgtaaagataaaaaattacaaaaacccagtcaagaaatcctgcagaacaaggaa
aaatgttctgattggattgcagagcatgttaaagaaaaacctagtcaaaaacaactaaat
ctggttaaaaaaatttgcgaagagtgtaaattggcaatgcccaccaataaaatattgaat
gacaaattcgctatctctaaatggattgataaacacaaaaagacaaagaaatga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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