KEGG   Helicobacter pylori F32: HPF32_0893
Entry
HPF32_0893        CDS       T01911                                 
Symbol
fliA
Name
(GenBank) flagellar biosynthesis sigma factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
heq  Helicobacter pylori F32
Pathway
heq02020  Two-component system
heq02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:heq00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HPF32_0893 (fliA)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    HPF32_0893 (fliA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:heq03021]
    HPF32_0893 (fliA)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:heq02035]
    HPF32_0893 (fliA)
Transcription machinery [BR:heq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HPF32_0893 (fliA)
Bacterial motility proteins [BR:heq02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    HPF32_0893 (fliA)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 UPF0122 MarR MarR_2 TetR_C_44 KORA DUF4202 HTH_10 HTH_34 DUF6447
Other DBs
NCBI-ProteinID: BAJ58475
Position
complement(963822..964565)
AA seq 247 aa
MPKEIQNIETNEKNIEKVLNAYDEQQHHHQDALAIQYLPAVRAMAFRLKERLPSSIDFND
LVSIGTEELIKLARRYESALNDSFWGYAKTRVNGAMLDYLRSLDVISRSNRKLIKSIDIE
ITKHLNEHGKEPSDAYLAQTLGENIEKIKEAKTASDIYALVPIDEQFNAIEQDEITKKIE
AEELLEHVQKALNQMSEREQILIQLYYFEELNLSEIKEILGITESRISQIIKEVIKKVRK
SLGVDHG
NT seq 744 nt   +upstreamnt  +downstreamnt
atgcccaaagaaattcaaaatattgaaaccaacgaaaaaaatatagaaaaggttttgaac
gcctatgatgagcagcaacaccaccatcaagacgcgctcgctattcagtatttaccggcc
gtgcgtgctatggcgtttcgtttaaaagagcgcttgcccagttctattgattttaatgat
ctggtttctattggcactgaagaattgattaaattagccaggcgttatgagagcgcgtta
aacgattctttttgggggtatgctaaaactcgtgtcaatggagcgatgttggattatttg
cgctctttagatgtgatttctcgctccaacagaaagctgattaaaagcattgatattgaa
atcaccaaacaccttaatgagcatgggaaagagcctagcgatgcgtatttagcgcaaact
ttaggcgaaaatattgaaaaaattaaagaagccaaaacggcttcagatatttatgcgtta
gtgccaatagatgagcaattcaatgcgattgagcaagatgaaatcactaaaaaaattgaa
gcagaagagttgttagagcatgtccaaaaagcgctgaatcaaatgagcgaaagagagcaa
atccttatccagctttattactttgaagagttgaatttgagcgagattaaagagatttta
ggcatcactgaatcgcgcatttctcaaatcattaaagaagtgattaaaaaggtgcgtaaa
tccttaggagtggatcatggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (13)   
   Pfam (13)   
All databases (22)   

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