KEGG   Helicobacter pylori Rif1: C695_00535
Entry
C695_00535        CDS       T02317                                 
Symbol
dnaK
Name
(GenBank) molecular chaperone DnaK
  KO
K04043  molecular chaperone DnaK
Organism
her  Helicobacter pylori Rif1
Pathway
her03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:her00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C695_00535 (dnaK)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:her03019]
    C695_00535 (dnaK)
   03110 Chaperones and folding catalysts [BR:her03110]
    C695_00535 (dnaK)
   03029 Mitochondrial biogenesis [BR:her03029]
    C695_00535 (dnaK)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:her04147]
    C695_00535 (dnaK)
Messenger RNA biogenesis [BR:her03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     C695_00535 (dnaK)
Chaperones and folding catalysts [BR:her03110]
 Heat shock proteins
  HSP70 / DNAK
   C695_00535 (dnaK)
Mitochondrial biogenesis [BR:her03029]
 Mitochondrial protein import machinery
  Matrix
   MMC/PAM proteins
    C695_00535 (dnaK)
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Proteins involved in Fe-S cluster biogenesis
    C695_00535 (dnaK)
Exosome [BR:her04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   C695_00535 (dnaK)
  Exosomal proteins of breast cancer cells
   C695_00535 (dnaK)
  Exosomal proteins of colorectal cancer cells
   C695_00535 (dnaK)
SSDB
Motif
Pfam: HSP70 MreB_Mbl FtsA
Other DBs
NCBI-ProteinID: AFV42922
Position
complement(116363..118225)
AA seq 620 aa
MGKVIGIDLGTTNSAMAVYEGNEAKIIANKEGKNTTPSIVAFTDKGEILVGESAKRQAVT
NPEKTIYSIKRIMGLMFNEDKAKEAEKRLPYKIVDRNGACAIEISGKVYTPQEISAKILM
KLKEDAESYLGESVTEAVITVPAYFNDSQRKATKEAGTIAGLNVLRIINEPTSAALAYGL
DKKESEKIMVYDLGGGTFDVTVLETGDNVVEVLATGGDAFLGGDDFDNRVIDFLASEFKS
ETGIEIKNDVMALQRLKEAAENAKKELSSAMETEINLPFITADATGPKHLVKKLTRAKFE
SLTEDLMKETISKIESVIKDAGLTKNEISEVVMVGGSTRIPKVQERVKAFINKDLNKSVN
PDEVVAVGASIQGGVLKGDVKDVLLLDVTPLSLGIETLGGVMTKVIDRGTTIPAKKSQVF
STAEDNQPAVSIMVLQGERELARDNKSLGKFDLQGIAPAPRGVPQIEVTFDIDANGILTV
SAQDKNTGKSQEIKISGSSGLSDSEIEKMVKDAELHKEEDAKKKEVIEARNHADSLAHQT
QKSLDEHKTNLNENDANEIQNAINALKDCVKNDNATKAELEDKTKLLAQAAQKLGEAMAN
KNNAEQPKKKDDDVIDAEVE
NT seq 1863 nt   +upstreamnt  +downstreamnt
atgggaaaagttattggaattgatttagggacaaccaactccgcaatggcggtttatgaa
ggcaatgaagcaaagattattgcgaataaagagggtaaaaacaccactccttctattgtg
gcttttacagataagggcgagattttagtgggcgagagcgccaaaagacaagcggtaacc
aacccagaaaaaaccatttattctattaaaagaatcatgggtttgatgtttaatgaagat
aaggctaaagaagccgaaaagcgcttgccttataagattgtggataggaatggggcttgc
gcgattgagatttcgggtaaagtttatacccctcaagagatttcagccaaaattttaatg
aagctcaaagaagacgctgaaagttatttgggcgagagcgttacggaagcggtgatcacg
gttccagcttattttaacgacagccaaaggaaagcgactaaagaagccggcacgattgca
gggcttaatgttttaaggatcatcaatgagcctacaagtgcggcattagcttatggcttg
gataaaaaagagagcgaaaaaatcatggtttatgatttgggtggggggacttttgatgtt
accgttttagaaacaggcgataatgtcgtggaagttttagccacagggggcgatgcgttt
ttagggggcgatgattttgacaatcgtgtgattgatttcttagcgagtgagtttaaaagc
gaaacgggcattgaaattaaaaacgatgtgatggcgttgcaacgcctaaaagaagcggct
gaaaacgctaaaaaagaattgagctctgcgatggagactgaaatcaatttgccctttatc
accgcggacgctaccgggcctaaacacttggttaaaaaactcactagggctaaatttgaa
agcttgacagaagatctcatgaaagaaacgatttctaaaattgaaagcgtgatcaaagat
gcggggctaaccaaaaatgagatttcagaagtggtgatggtgggaggctctactcgtatc
cctaaagtccaagaaagggtgaaagcgtttattaataaagatttgaataaaagcgtcaat
cctgatgaggtcgtagcggtgggagcgagcattcaagggggcgtgttgaaaggcgatgtg
aaagatgtgcttttattagacgttacgcctttaagccttgggattgaaactttagggggc
gtgatgactaaagtgattgatagaggcacgactattccggcgaaaaaatctcaagtgttc
tcaaccgctgaagacaaccagcccgctgtgtccattatggttttacaaggcgagagagaa
ttggcaagggataataaatctttgggtaaatttgatttgcaaggcatcgctccagctcca
agaggcgtgccgcaaattgaagtaacctttgatattgacgctaacgggattttaaccgtt
tcagcgcaagataaaaataccggcaaaagccaagagattaaaatttctggttctagcggg
ttgtctgatagcgaaattgaaaaaatggtgaaagacgctgaattgcacaaagaagaagac
gctaagaaaaaagaagtgattgaagcgagaaaccatgccgatagtttggcgcaccaaacc
caaaagagccttgatgagcataaaacgaatttgaatgaaaacgacgctaacgagatccaa
aacgccattaacgctcttaaagattgcgtcaaaaacgataacgctactaaagcggagctt
gaagacaaaacgaaattattagcgcaagcggctcaaaaattaggcgaagccatggcgaat
aaaaacaacgccgagcagcccaagaaaaaagacgacgatgtgattgatgcggaagtggag
tga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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