KEGG   Helicobacter pylori Rif1: C695_04735
Entry
C695_04735        CDS       T02317                                 
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
  KO
K01955  carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
Organism
her  Helicobacter pylori Rif1
Pathway
her00240  Pyrimidine metabolism
her00250  Alanine, aspartate and glutamate metabolism
her01100  Metabolic pathways
her01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:her00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    C695_04735 (carB)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    C695_04735 (carB)
Enzymes [BR:her01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.5  carbamoyl-phosphate synthase (glutamine-hydrolysing)
     C695_04735 (carB)
SSDB
Motif
Pfam: CPSase_L_D2 CPSase_L_D3 MGS ATP-grasp ATP-grasp_3 ATP-grasp_4 ATPgrasp_Ter Dala_Dala_lig_C RimK ATP-grasp_2
Other DBs
NCBI-ProteinID: AFV43725
Position
complement(974173..977430)
AA seq 1085 aa
MPKRTDISNILLIGSGPIVIGQACEFDYSGTQSCKTLKSLGYRVILINSNPATVMTDPEF
SHQTYIQPITPENIATIIEKEKIDAILPTMGGQTALNAVMQMHQKGMLEGVELLGAKIEA
IKKGEDRQAFKEAMLKIGMDLPKGRYAYTELEALEAINEIGFPAIIRASFTLAGGGSGVA
YNIEEFQELAKNALDASPINEILIEESLLGWKEYEMEVIRDSKDNCIIVCCIENIDPMGV
HTGDSITIAPSLTLTDKEYQRMRDASFAILREIGVDTGGSNVQFAIHPETLRMVVIEMNP
RVSRSSALASKATGFPIAKVATMLAVGFSLDEIQNDITNTPASFEPSLDYIVVKIPRFAF
EKFAGVSSTLGTSMKSIGEVMAIGGNFLEALQKALCSLENNWLGFESLSKDLEAIKKEIR
RPNPKRLLYIADAFRLGVCVDEVFELCQIDRWFLSQIQKLVEVEESINSSVLTDAKKLRG
LKNLGFSDARIAAKIKENENLEVSPFEVELARSNLQIVPNFEEVDTCAAEFLSLTPYLYS
TYAPNPLPPIENKQEKKEKKILIIGSGPNRIGQGIEFDYCCVHASLALKDLNIKSVMFNC
NPETVSTDYDTSDTLYFEPIHFECVKSIIQRERVDGIIVHFGGQTPLKLAKDLAKMQAPI
IGTPFKVIDIAEDREKFSLFLKELDIKQPKNGMAKSVDEAYSIANVIGFPIIVRPSYVLG
GQHMQILENIEELRHYLESVTHALEISPKNPLLIDKFLEKAVELDVDAICDKKEVYIAGI
LQHIEEAGIHSGDSACFIPSTLSPEILDEIERVSAKIALHLGVVGLLNIQFAVHQNSLYL
IEVNPRASRTVPFLSKALGVPLAKVATRVMVLEDLKEALKFYDKKNIVGYSKGVYKPKMP
HFVALKEAVFPFNKLYGSDLILGPEMKSTGEVMGIARSLGLAFFKAQTACFNPIKNKGLI
FVSIKDKDKEEACVLMKRLVQLGFELCATEGTHKALEKAGVKSLKVLKISEGRPNIMDLM
MNGEISMAINTSDHKSQDDAKLIRASVLKNHVSYFTTLSTIEVLLLALEESSKEDELLAL
QDYLK
NT seq 3258 nt   +upstreamnt  +downstreamnt
atgcctaaacgcaccgatatttccaacattctactgataggatcaggccctattgtgatc
ggacaagcttgcgaatttgactactcagggactcaaagttgtaaaaccttaaaatcttta
ggttatagagtgatcttaatcaattctaacccggccaccgtgatgactgaccctgaattt
tctcatcaaacttatatccaacccatcaccccagaaaatatcgccactatcattgaaaaa
gaaaagattgacgctattttacccacaatgggcgggcaaaccgctttgaatgcggtcatg
caaatgcaccaaaagggcatgttagaaggcgtggagcttttgggggctaagattgaagcg
attaaaaaaggcgaagacaggcaggctttcaaagaagcgatgttaaaaatcgggatggat
ttgcctaaagggcgttatgcttacacggagttagaagccctagaagccattaatgaaatt
ggctttccagccattatcagagcgagtttcactctggctgggggggggagtggggtcgct
tacaatattgaagagtttcaagaattggctaaaaacgccctggacgcttcgcccattaat
gaaattttgattgaagagtccttattggggtggaaggaatacgaaatggaagtcatacga
gacagcaaggacaattgcatcattgtgtgctgcattgaaaatattgaccccatgggcgtt
cataccggcgatagcatcaccatcgctccaagcctaaccttaaccgataaagaataccaa
cgcatgcgcgatgcgagctttgcgattttgagagaaattggcgtggatacgggcgggagt
aatgtgcaatttgcgatccaccccgagactttaagaatggtcgtgattgaaatgaaccca
cgggtgagccgcagctccgcattagcttcaaaagcgaccgggtttcccattgcaaaagtc
gctaccatgcttgcggtgggttttagcttagatgaaatccaaaacgatattaccaacacc
ccggcgagttttgagcctagtttggattatatcgtggtgaaaatccctcgctttgcgttt
gaaaagtttgccggtgtttctagcactttagggacttctatgaaaagcattggcgaagtg
atggcgataggggggaatttcttagaagccttacaaaaagcgctatgctctttggaaaac
aattggctagggtttgaatcgttaagcaaagatttagaagcgatcaaaaaggaaatccgc
cggcccaatcccaaacgcttgctttatatcgctgatgcgttcaggctcggcgtttgtgtt
gatgaagtgtttgaattgtgccagattgacaggtggtttttatctcaaatccaaaagcta
gtagaagtggaagaaagcatcaattctagcgttttaacagacgctaaaaaattaagaggg
cttaaaaatttaggctttagcgatgctaggattgccgctaaaatcaaagaaaatgaaaat
ttagaggtcagcccttttgaagtggaattagctagatctaatttacaaatcgtgcccaat
tttgaagaagtggacacttgcgcggcggagtttttatcgctcacgccttatttgtattcc
acctatgcccccaatcctttgccccctattgaaaacaaacaagaaaagaaagaaaagaaa
atcctaatcataggctctgggcctaatcgcatcggtcaaggcattgaatttgattattgt
tgcgtgcatgcgagccttgctttaaaagatttaaacattaaaagcgtcatgttcaattgc
aatccagaaactgttagcacggattatgataccagcgacacgctctattttgaacccatt
cattttgagtgcgtgaaaagcatcatccaaagggagcgagtggatggcattatcgtgcat
tttgggggacaaacccctttaaaactcgctaaagatttggctaaaatgcaagcccccatt
attggcacgccttttaaagtgattgatattgcagaagacagggaaaaattttccctcttt
ttaaaagagcttgacatcaagcagcccaaaaacggcatggctaagagcgttgatgaagct
tatagcatcgctaatgtgattggtttccctatcattgtgcgccctagttatgtgctaggc
ggccaacacatgcaaattttagaaaacattgaggaattgcgccattatttggaaagcgtt
acgcatgctttagagattagtcctaaaaacccgcttctcattgataagtttttagaaaaa
gcggtggaattagatgtggatgctatttgcgataaaaaagaggtttatattgccggcatt
ttacagcacattgaagaagccggaatccattcaggcgattcggcgtgctttatcccttcc
actctaagccctgaaattttagatgaaattgagcgggtgagcgcaaaaatcgctctgcat
ttgggcgtagtagggctgttgaatatccaatttgctgtgcatcaaaattcgctgtatttg
attgaagtcaatcccagagccagccgaaccgtgccttttttaagcaaggctttaggcgtt
cctttagccaaagtggcgactagggttatggtgctagaagacttgaaagaagccttgaag
ttttatgataaaaaaaatatcgttggatattctaaaggcgtttataagcctaaaatgccc
cattttgtggctttaaaagaagcggttttcccttttaataaactttatggatcggatttg
attttagggcctgagatgaaaagcaccggcgaagtgatggggattgctagatctttaggg
cttgcatttttcaaggctcaaacggcttgctttaaccccattaaaaacaaggggcttatt
tttgtttctattaaagataaggataaagaagaagcatgcgttttaatgaagcgattggtt
cagttgggctttgaattgtgcgccacagaaggcacgcataaagctttggaaaaagccggg
gtaaagtctttaaaggtgcttaaaatctctgaaggccgccccaatatcatggatttgatg
atgaatggggaaatcagcatggctatcaacaccagcgatcacaaatctcaagatgacgct
aaactcatccgcgcttctgtgcttaaaaaccatgtgagttatttcacgactttaagcacg
atagaagtcttacttttagcgttagaagaaagctctaaagaagacgagttgttagcctta
caagattatttgaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (38)   

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