KEGG   Helicobacter pylori Rif1: C695_05500
Entry
C695_05500        CDS       T02317                                 
Symbol
gidB
Name
(GenBank) 16S rRNA methyltransferase GidB
  KO
K03501  16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
Organism
her  Helicobacter pylori Rif1
Brite
KEGG Orthology (KO) [BR:her00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:her03009]
    C695_05500 (gidB)
   03036 Chromosome and associated proteins [BR:her03036]
    C695_05500 (gidB)
Enzymes [BR:her01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.170  16S rRNA (guanine527-N7)-methyltransferase
     C695_05500 (gidB)
Ribosome biogenesis [BR:her03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    C695_05500 (gidB)
Chromosome and associated proteins [BR:her03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    C695_05500 (gidB)
SSDB
Motif
Pfam: GidB Methyltransf_31 Methyltransf_4 DUF4934 Methyltransf_23 MTS Methyltransf_12
Other DBs
NCBI-ProteinID: AFV43870
Position
1124087..1124623
AA seq 178 aa
MNPLLQDYARILLEWNQTHNLSGAKNLSELEPQITDALKPLEFIKDFKSCLDIGSGAGLP
AIPLALEKPEVKFILLEPRIKRAAFLNYLKSVLPLKNIEIIKKRLEDYQNLLQVDLITSR
AVASSSFLIEKSQRFLKDKGYFLFYKGEQLKDEIACKDTECFMHQKRVYFYKSKESLC
NT seq 537 nt   +upstreamnt  +downstreamnt
atgaaccccttattgcaagattatgcgcgcatccttttagaatggaatcaaacgcacaac
ttgagcggtgcaaaaaatttaagcgagttagaaccccagatcacagacgctctaaaaccc
ttagaatttatcaaagattttaaaagttgtttggatattgggagcggggcgggactccct
gctatccctttagcccttgaaaaacctgaagtcaaattcattcttttagagccaagaata
aaaagagcggcttttttaaactaccttaaaagcgttttgcctttaaaaaatattgaaatc
attaaaaagcgtttagaagattatcaaaatcttttacaagtggatttgatcacttccaga
gcggtcgctagctcttcttttttgatagaaaaaagccaacgcttcctaaaagataagggg
tattttttattctataaaggcgagcagttaaaagatgaaatcgcttgtaaagacactgaa
tgctttatgcatcaaaaacgagtttatttttacaaatcaaaggaaagtttatgttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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