KEGG   Helicobacter pylori SouthAfrica7: HPSA_02930
Entry
HPSA_02930        CDS       T01921                                 
Name
(GenBank) recombination and DNA strand exchange inhibitor protein
  KO
K07456  DNA mismatch repair protein MutS2
Organism
hes  Helicobacter pylori SouthAfrica7
Pathway
hes03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hes00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    HPSA_02930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hes03400]
    HPSA_02930
DNA repair and recombination proteins [BR:hes03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     HPSA_02930
SSDB
Motif
Pfam: Smr MutS_V AAA_22 AAA_21 AAA_15 SBDS Emaravirus_P4 FAM184
Other DBs
NCBI-ProteinID: ADU84589
UniProt: E8QVW8
Position
complement(599182..601422)
AA seq 746 aa
MNNTPPKPLEESLDLKEFIALFKTFFAKERGSIALENDLKQAFTYLNEVDAIGLIAPKSV
KESDLILIKLTKLGTLHLDEIYEIVKRLRYIVILQNAFKNFTHLKFYERLNAIVLPLFFK
DLIPLFDDEGKIKQGANATLDALNESLSRLKKESAKIIRNYAHSKELAPYLVDTQSHFKH
GYECLLLKSGFSSAIKGVVLERSANGYFYLLPESAQKIAQKIAQIDNEIDCCISEMCQTL
SHSLQKHLLFLKFLFKEFDFLDSLQARLNFAKAYNLEFVMPSFTQKKMVLENFSHPILKD
PKPLNLKFEKSMLAVTGVNAGGKTMLLKSLLSAAFLSKHLIPMKINAHHSVIPYFKEIHA
IINDPQNSANNISTFAGRMKQFSALLSKENMLLGVDEIELGTDADEASSLYKTLLEKLLK
QNNQIIITTHHKRLSVLMAENQEVELLAALYDEEKERPTYTFLKGVVGKSYAFETALRYG
VPRFLIEKAKAFYGEDKEKLNVLIENSSALERELKQKNERLENALKEQEELKNAWLLETE
KQKEIFHNKKLELEKSYQQALNALKSEVASKDTSSMHKEIHKASEILNKHKSSHETPQIT
TSFQANEKARYKNESVLIAQILDKGYYLIETEFGMRLKVHGSLLKKIQKPPKNKFKPPKT
IIPKPKEASLRLDLRGQRSEEALDLLDAFLNNALLGGFEEVLICHGKGSGILEKFVKEFL
KNHPKVASFSDAPINLGGSGVKIVKL
NT seq 2241 nt   +upstreamnt  +downstreamnt
atgaataataccccgccaaaacccctagaagaaagcctggacttaaaagagtttatcgct
ctttttaaaaccttttttgcaaaagaaagaggttctattgctttagaaaacgatctcaaa
caggctttcacttacctgaatgaagtggatgcgatcggtttgatcgcccctaaaagcgtg
aaagaaagcgatcttattcttatcaaactcaccaaattaggaacgcttcatttagatgaa
atttatgagatcgtcaaacgattgcgctacattgtcattttgcaaaacgcttttaaaaat
ttcacgcatttaaaattttatgaacgccttaatgctattgttttgcctttattttttaag
gatttaatccctttatttgatgatgaagggaaaatcaaacaaggggctaacgccactcta
gacgctttaaatgagagtttgagccgccttaaaaaagagagcgctaaaatcattcgtaat
tacgcgcattctaaagagcttgccccttatttagtggatacccaaagccattttaagcat
ggttatgaatgccttttattaaaaagcgggttttctagcgcgattaagggcgttgtgtta
gaaaggagcgctaatggctatttttatcttttgccagaaagcgcgcaaaaaatcgcgcaa
aaaatcgcgcaaattgacaatgaaatagattgttgtattagtgaaatgtgtcaaacttta
agccatagcttgcaaaaacaccttttatttttaaaattccttttcaaagaatttgacttt
ttagacagcttgcaagcccggctcaatttcgctaaagcctacaatttagaatttgtcatg
ccaagttttacgcaaaaaaaaatggttttagaaaacttttcgcaccccattttaaaagat
ccaaagcctttaaatttgaagtttgaaaaatccatgctcgctgttactggcgtgaatgcg
ggcgggaaaaccatgctcttaaaatcgcttttaagcgcggcttttttaagcaagcacctc
attcctatgaaaatcaacgcccatcattcggttatcccttatttcaaagaaatccacgcc
attatcaacgacccccaaaacagcgcgaacaatatctctacttttgcaggcagaatgaag
caatttagcgctcttttatccaaagaaaacatgcttttaggcgttgatgaaattgagtta
gggactgacgctgatgaggcgagcagtttgtataaaaccttgttagagaaattgctcaaa
caaaataatcaaatcattatcaccacgcaccacaaacgcttaagcgtgttaatggcagaa
aaccaagaagtggaattactagccgctctttatgatgaagaaaaagaacggcccacttac
acttttttaaaaggcgttgttggcaaaagttatgcgtttgaaaccgctttgcgttatggc
gtgccacggtttttgattgaaaaagcgaaagcgttttatggcgaagataaggaaaaattg
aatgttttgattgaaaattccagcgcgctagaaagggaattgaaacaaaaaaatgagcgt
ttagagaacgctttaaaagaacaagaagagttaaaaaatgcatggcttttggaaacagaa
aaacaaaaagaaatctttcacaataaaaaattggaattggaaaaatcttaccaacaagcc
ttgaatgcgctaaaaagcgaagtcgcttcaaaagacaccagctctatgcataaagaaatc
cataaagcgagcgagattttaaacaaacataaaagtagccatgaaaccccacaaatcaca
acaagctttcaggctaacgaaaaagcgcgctataaaaatgaaagcgtgctgatcgctcag
attttggataagggctattatttgatagaaaccgagtttggcatgcgcttgaaagtgcat
gggagtttgttaaaaaaaatccaaaaaccccctaaaaacaaattcaaaccccctaaaacc
atcattcctaaacctaaagaagcgagcttgcgccttgatttgagagggcaacgcagcgaa
gaagctttggatttattggacgcctttttaaacaatgcgcttttaggaggctttgaagaa
gtgctgatttgtcatggcaaagggagtgggattttggaaaagtttgtgaaagaattttta
aaaaaccaccctaaagtggcaagctttagcgacgctcccattaatttaggcggcagtggg
gttaaaatcgttaaattgtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (16)   

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