KEGG   Helicobacter pylori XZ274: MWE_0790
Entry
MWE_0790          CDS       T02130                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
hey  Helicobacter pylori XZ274
Pathway
hey02020  Two-component system
hey02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:hey00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MWE_0790
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    MWE_0790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hey03021]
    MWE_0790
Transcription machinery [BR:hey03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MWE_0790
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: AFJ81631
UniProt: A0AA85YZ90
Position
700657..701901
AA seq 414 aa
MAILRANLSPKNKLNATLKGWLPILQSELEDLEEVLKQNALDNPLIKIENKRIKNFSDRF
SAKNSSDHLENFAIASKSLFETLEAQIIPPLFPTETSQKIAMDIINGLNSEGYFEENIEE
RARILGVESEVYEKVRKRFSYLNPAGIGARDVKESFLFQLEGRELDNNELYEEARKIILN
LEKHHEFSKDFYYEKALKILKSFKNPPAIEFLEKEIEVIPELFILEVDNEIIVRLNDESY
PTISLEENRFKDSAYLKEKLKEAKDLIDALNLRKATIYKIGLMLLEYQYDFFKGKKLRPL
KLLDLANEFNHSVSTISRAISNKYLACQRGVFPIKHFFSTALDNSETSNAVIKDYLLELI
KNEDKKEPLSDAKILELIEEKFHLKMVRRTITKYRQLLNIASSSERKKLYLMRA
NT seq 1245 nt   +upstreamnt  +downstreamnt
atggcgatcttacgcgcaaaccttagccctaaaaacaaattaaacgctaccttaaaaggg
tggctccccattttacaaagcgagcttgaagatttagaagaagtgttgaaacaaaacgcc
ctggataaccccttaatcaaaattgaaaacaaacgcatcaaaaattttagcgatcgcttt
agtgctaaaaatagcagcgatcatttagaaaatttcgcaatcgcttctaaaagccttttt
gaaaccttagaagctcaaatcattccccccctctttcccactgaaacctctcaaaaaatt
gctatggatattatcaacgggctaaatagtgaagggtattttgaagaaaacattgaagaa
agggctagaattttaggggtagagagcgaagtttatgaaaaagtgcgcaagcgttttagt
taccttaatcctgctggcattggtgctagagatgtgaaagagagctttttattccagtta
gagggtagggaattagacaataacgagctttatgaagaagcgcgaaaaatcattttaaat
ttagaaaaacaccacgaattttctaaagatttttattatgaaaaggctttaaagatttta
aaatcctttaaaaaccccccggccattgagtttttagaaaaagaaatagaagtcattccg
gagctttttattctagaagtggataatgaaatcatcgtgcgtttgaatgatgagagctac
ccaacgatcagtttagaagaaaatcgctttaaagatagcgcttatttaaaagaaaaatta
aaagaggctaaggatttgattgatgcgttaaatttgagaaaagctacaatttataaaatc
ggtctcatgcttttagagtatcaatacgatttttttaagggtaaaaaattgcgtccttta
aaattattggatttagccaatgagtttaaccactctgtaagcacgatttcaagggctatt
tctaataaatatttggcatgtcaaaggggggttttccctattaaacatttctttagcacc
gccttagacaatagcgagacttcaaacgctgtgattaaagactaccttttagaattgatt
aaaaatgaagacaaaaaagagcctttgagcgacgctaagattttagaactcattgaagaa
aaattccatttgaaaatggtaagaagaacgatcaccaaataccgccaactgctcaacatc
gcttcttcaagcgaaaggaaaaagctctatttgatgcgtgcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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